CITATION.bib

@Inbook{Zorrilla2022,
author="Zorrilla, Francisco
and Kerkhoven, Eduard J.",
editor="Mapelli, Valeria
and Bettiga, Maurizio",
title="Reconstruction of Genome-Scale Metabolic Model for Hansenula polymorpha Using RAVEN",
bookTitle="Yeast Metabolic Engineering: Methods and Protocols",
year="2022",
publisher="Springer US",
address="New York, NY",
pages="271--290",
abstract="Genome-scale metabolic models (GEMs) provide a useful framework for modeling the metabolism of microorganisms. While the applications of GEMs are wide and far reaching, the reconstruction and continuous curation of such models can be perceived as a tedious and time-consuming task. Using RAVEN, a MATLAB-based toolbox designed to facilitate the reconstruction analysis of metabolic networks, this protocol practically demonstrates how researchers can create their own GEMs using a homology-based approach. To provide a complete example, a draft GEM for the industrially relevant yeast Hansenula polymorpha is reconstructed.",
isbn="978-1-0716-2399-2",
doi="10.1007/978-1-0716-2399-2_16",
url="https://doi.org/10.1007/978-1-0716-2399-2_16"
}