Table of Contents generated with DocToc
The following table summarizes the different features types and their equivalent in GENtle/SYBIL.
GENtle/SYBIL | Genebank |
---|---|
cds | CDS |
gap | assembly_gap |
attenuator | |
C_region (parent: CDS) | |
CAAT_signal | |
centromere | |
D-loop | |
cds | D_segment (parent: CDS) |
enhancer | enhancer |
exon | exon |
gap | |
GC_signal | |
gene | gene |
iDNA | |
intron | intron |
cds | J_segment (parent: CDS) |
LTR | |
peptide | mat_peptide |
misc_binding | |
misc_difference | |
misc_feature | |
misc_recomb | |
misc_RNA | |
misc_signal | |
misc_structure | |
mobile_element | |
modified_base | |
mRNA | |
ncRNA | |
cds | N_region (parent: CDS) |
old_sequence | |
operon | |
oriT | |
polyA_signal | |
polyA_site | |
precursor_RNA | |
prim_transcript | |
primer_bind | |
promoter | promoter |
protein_bind | protein_bind |
rbs | RBS |
repeat_region | |
ori | rep_origin |
rRNA | rRNA |
cds | S_region (parent: CDS) |
peptide | sig_peptide |
source | |
stem_loop | |
STS | |
TATA_signal | |
telomere | |
terminator | terminator |
tmRNA | tmRNA |
peptide | transit_peptide |
tRNA | tRNA |
unsure | |
cds | V_region (parent: CDS) |
cds | V_segment (parent: CDS) |
variation | |
3'UTR | |
5'UTR | |
-10_signal | |
-35_signal | |
note | |
misc | |
alu_element | |
cre | |
crispr | |
mre | |
pseudogene | |
tre | |
binding_domain | |
protein_domain | |
protein_tag | |
lncRNA | |
miRNA | |
piRNA | |
rasiRNA | |
ribozymes |
Notes:
- Genebank source