.nf-core.yml

lint:
  files_unchanged:
    - LICENSE
    - .github/CONTRIBUTING.md
    - .github/ISSUE_TEMPLATE/bug_report.yml
    - .github/ISSUE_TEMPLATE/config.yml
    - .github/ISSUE_TEMPLATE/feature_request.yml
    - .github/PULL_REQUEST_TEMPLATE.md
    - .github/workflows/branch.yml
    - .github/workflows/linting.yml
    - assets/email_template.html
    - assets/email_template.txt
    - assets/sendmail_template.txt
    - docs/README.md
    - .gitignore

  files_exist:
    - assets/nf-core-qbic-pipelines/rnadeseq_logo_light.png
    - conf/test_full.config
    - docs/images/nf-core-qbic-pipelines/rnadeseq_logo_light.png
    - docs/images/nf-core-qbic-pipelines/rnadeseq_logo_dark.png
    - bin/markdown_to_html.r
    - .github/workflows/push_dockerhub.yml
    - assets/multiqc_config.yaml
    - .github/workflows/awstest.yml
    - .github/workflows/awsfulltest.yml
    - lib/WorkflowQbic-pipelines/rnadeseq.groovy
  nextflow_config:
    - params.input
    - show_hidden_params
    - manifest.name
    - manifest.homePage

repository_type: pipeline