playground.ts

/* Copyright 2016 Google Inc. All Rights Reserved.

Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at

    http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
==============================================================================*/

/// <reference path="typings/browser.d.ts" />
/// <reference path="seedrandom.d.ts" />

import * as nn from "./nn";
import {HeatMap, reduceMatrix} from "./heatmap";
import {
  State,
  datasets,
  regDatasets,
  activations,
  problems,
  regularizations,
  getKeyFromValue,
  Problem
} from "./state";
import {Example2D, shuffle} from "./dataset";
import {AppendingLineChart} from "./linechart";

var mainWidth;

// More scrolling
d3.select(".more button").on("click", function() {
  var position = 800;
  d3.transition()
    .duration(1000)
    .tween("scroll", scrollTween(position));
});

function scrollTween(offset) {
  return function() {
    var i = d3.interpolateNumber(window.pageYOffset || document.documentElement.scrollTop, offset);
    return function(t) { scrollTo(0, i(t)); };
  };
}

const RECT_SIZE = 30;
const NUM_SAMPLES_CLASSIFY = 500;
const NUM_SAMPLES_REGRESS = 1200;
const DENSITY = 100;

interface InputFeature {
  f: (x: number, y: number) => number;
  label?: string;
}

let INPUTS: {[name: string]: InputFeature} = {
  "x": {f: (x, y) => x, label: "X_1"},
  "y": {f: (x, y) => y, label: "X_2"},
  "xSquared": {f: (x, y) => x * x, label: "X_1^2"},
  "ySquared": {f: (x, y) => y * y,  label: "X_2^2"},
  "xTimesY": {f: (x, y) => x * y, label: "X_1X_2"},
  "sinX": {f: (x, y) => Math.sin(x), label: "sin(X_1)"},
  "sinY": {f: (x, y) => Math.sin(y), label: "sin(X_2)"},
};

let HIDABLE_CONTROLS = [
  ["Show test data", "showTestData"],
  ["Discretize output", "discretize"],
  ["Play button", "playButton"],
  ["Learning rate", "learningRate"],
  ["Activation", "activation"],
  ["Regularization", "regularization"],
  ["Regularization rate", "regularizationRate"],
  ["Problem type", "problem"],
  ["Which dataset", "dataset"],
  ["Ratio train data", "percTrainData"],
  ["Noise level", "noise"],
  ["Batch size", "batchSize"],
  ["# of hidden layers", "numHiddenLayers"],
];

class Player {
  private timerIndex = 0;
  private isPlaying = false;
  private callback: (isPlaying: boolean) => void = null;

  /** Plays/pauses the player. */
  playOrPause() {
    if (this.isPlaying) {
      this.isPlaying = false;
      this.pause();
    } else {
      this.isPlaying = true;
      this.play();
    }
  }

  onPlayPause(callback: (isPlaying: boolean) => void) {
    this.callback = callback;
  }

  play() {
    this.pause();
    this.isPlaying = true;
    if (this.callback) {
      this.callback(this.isPlaying);
    }
    this.start(this.timerIndex);
  }

  pause() {
    this.timerIndex++;
    this.isPlaying = false;
    if (this.callback) {
      this.callback(this.isPlaying);
    }
  }

  private start(localTimerIndex: number) {
    d3.timer(() => {
      if (localTimerIndex < this.timerIndex) {
        return true;  // Done.
      }
      oneStep();
      return false;  // Not done.
    }, 0);
  }
}

let state = State.deserializeState();

// Filter out inputs that are hidden.
state.getHiddenProps().forEach(prop => {
  if (prop in INPUTS) {
    delete INPUTS[prop];
  }
});

let boundary: {[id: string]: number[][]} = {};
let selectedNodeId: string = null;
// Plot the heatmap.
let xDomain: [number, number] = [-6, 6];
let heatMap =
    new HeatMap(300, DENSITY, xDomain, xDomain, d3.select("#heatmap"),
        {showAxes: true});
let linkWidthScale = d3.scale.linear()
  .domain([0, 5])
  .range([1, 10])
  .clamp(true);
let colorScale = d3.scale.linear<string>()
                     .domain([-1, 0, 1])
                     .range(["#f59322", "#e8eaeb", "#0877bd"])
                     .clamp(true);
let iter = 0;
let trainData: Example2D[] = [];
let testData: Example2D[] = [];
let network: nn.Node[][] = null;
let lossTrain = 0;
let lossTest = 0;
let player = new Player();
let lineChart = new AppendingLineChart(d3.select("#linechart"),
    ["#777", "black"]);

function makeGUI() {
  d3.select("#reset-button").on("click", () => {
    reset();
    d3.select("#play-pause-button");
  });

  d3.select("#play-pause-button").on("click", function () {
    // Change the button's content.
    player.playOrPause();
  });

  player.onPlayPause(isPlaying => {
    d3.select("#play-pause-button").classed("playing", isPlaying);
  });

  d3.select("#next-step-button").on("click", () => {
    player.pause();
    oneStep();
  });

  d3.select("#data-regen-button").on("click", () => {
    generateData();
  });

  let dataThumbnails = d3.selectAll("canvas[data-dataset]");
  dataThumbnails.on("click", function() {
    let newDataset = datasets[this.dataset.dataset];
    if (newDataset === state.dataset) {
      return; // No-op.
    }
    state.dataset =  newDataset;
    dataThumbnails.classed("selected", false);
    d3.select(this).classed("selected", true);
    generateData();
    reset();
  });

  let datasetKey = getKeyFromValue(datasets, state.dataset);
  // Select the dataset according to the current state.
  d3.select(`canvas[data-dataset=${datasetKey}]`)
    .classed("selected", true);

  let regDataThumbnails = d3.selectAll("canvas[data-regDataset]");
  regDataThumbnails.on("click", function() {
    let newDataset = regDatasets[this.dataset.regdataset];
    if (newDataset === state.regDataset) {
      return; // No-op.
    }
    state.regDataset =  newDataset;
    regDataThumbnails.classed("selected", false);
    d3.select(this).classed("selected", true);
    generateData();
    reset();
  });

  let regDatasetKey = getKeyFromValue(regDatasets, state.regDataset);
  // Select the dataset according to the current state.
  d3.select(`canvas[data-regDataset=${regDatasetKey}]`)
    .classed("selected", true);

  d3.select("#add-layers").on("click", () => {
    if (state.numHiddenLayers >= 6) {
      return;
    }
    state.networkShape[state.numHiddenLayers] = 2;
    state.numHiddenLayers++;
    reset();
  });

  d3.select("#remove-layers").on("click", () => {
    if (state.numHiddenLayers <= 0) {
      return;
    }
    state.numHiddenLayers--;
    state.networkShape.splice(state.numHiddenLayers);
    reset();
  });

  let showTestData = d3.select("#show-test-data").on("change", function() {
    state.showTestData = this.checked;
    state.serialize();
    heatMap.updateTestPoints(state.showTestData ? testData : []);
  });
  // Check/uncheck the checkbox according to the current state.
  showTestData.property("checked", state.showTestData);

  let discretize = d3.select("#discretize").on("change", function() {
    state.discretize = this.checked;
    state.serialize();
    updateUI();
  });
  // Check/uncheck the checbox according to the current state.
  discretize.property("checked", state.discretize);

  let percTrain = d3.select("#percTrainData").on("input", function() {
    state.percTrainData = this.value;
    d3.select("label[for='percTrainData'] .value").text(this.value);
    generateData();
    reset();
  });
  percTrain.property("value", state.percTrainData);
  d3.select("label[for='percTrainData'] .value").text(state.percTrainData);

  let noise = d3.select("#noise").on("input", function() {
    state.noise = this.value;
    d3.select("label[for='noise'] .value").text(this.value);
    generateData();
    reset();
  });
  noise.property("value", state.noise);
  d3.select("label[for='noise'] .value").text(state.noise);

  let batchSize = d3.select("#batchSize").on("input", function() {
    state.batchSize = this.value;
    d3.select("label[for='batchSize'] .value").text(this.value);
    reset();
  });
  batchSize.property("value", state.batchSize);
  d3.select("label[for='batchSize'] .value").text(state.batchSize);

  let activationDropdown = d3.select("#activations").on("change", function() {
    state.activation = activations[this.value];
    reset();
  });
  activationDropdown.property("value",
      getKeyFromValue(activations, state.activation));

  let learningRate = d3.select("#learningRate").on("change", function() {
    state.learningRate = +this.value;
  });
  learningRate.property("value", state.learningRate);

  let regularDropdown = d3.select("#regularizations").on("change",
      function() {
    state.regularization = regularizations[this.value];
    reset();
  });
  regularDropdown.property("value",
      getKeyFromValue(regularizations, state.regularization));

  let regularRate = d3.select("#regularRate").on("change", function() {
    state.regularizationRate = +this.value;
    reset();
  });
  regularRate.property("value", state.regularizationRate);

  let problem = d3.select("#problem").on("change", function() {
    state.problem = problems[this.value];
    generateData();
    drawDatasetThumbnails();
    reset();
  });
  problem.property("value", getKeyFromValue(problems, state.problem));

  // Add scale to the gradient color map.
  let x = d3.scale.linear().domain([-1, 1]).range([0, 144]);
  let xAxis = d3.svg.axis()
    .scale(x)
    .orient("bottom")
    .tickValues([-1, 0, 1])
    .tickFormat(d3.format("d"));
  d3.select("#colormap g.core").append("g")
    .attr("class", "x axis")
    .attr("transform", "translate(0,10)")
    .call(xAxis);

  // Listen for css-responsive changes and redraw the svg network.

  window.addEventListener("resize", () => {
    var newWidth = document.querySelector("#main-part").getBoundingClientRect().width;
    if (newWidth !== mainWidth) {
      mainWidth = newWidth;
      drawNetwork(network);
      updateUI(true);
    }
  });
}

function updateWeightsUI(network: nn.Node[][], container: d3.Selection<any>) {
  for (let layerIdx = 1; layerIdx < network.length; layerIdx++) {
    let currentLayer = network[layerIdx];
    // Update all the nodes in this layer.
    for (let i = 0; i < currentLayer.length; i++) {
      let node = currentLayer[i];
      for (let j = 0; j < node.inputLinks.length; j++) {
        let link = node.inputLinks[j];
        container.select(`#link${link.source.id}-${link.dest.id}`)
            .style({
              "stroke-dashoffset": -iter / 3,
              "stroke-width": linkWidthScale(Math.abs(link.weight)),
              "stroke": colorScale(link.weight)
            })
            .datum(link);
      }
    }
  }
}

function drawNode(cx: number, cy: number, nodeId: string, isInput: boolean,
    container: d3.Selection<any>) {
  let x = cx - RECT_SIZE / 2;
  let y = cy - RECT_SIZE / 2;

  let nodeGroup = container.append("g")
    .attr({
      "class": "node",
      "id": `node${nodeId}`,
      "transform": `translate(${x},${y})`
    });

  // Draw the main rectangle.
  nodeGroup.append("rect")
    .attr({
      x: 0,
      y: 0,
      width: RECT_SIZE,
      height: RECT_SIZE,
    });
  let activeOrNotClass = state[nodeId] ? "active" : "inactive";
  if (isInput) {
    let label = INPUTS[nodeId].label != null ?
        INPUTS[nodeId].label : nodeId;
    // Draw the input label.
    let text = nodeGroup.append("text").attr({
      class: "main-label",
      x: -10,
      y: RECT_SIZE / 2, "text-anchor": "end"
    });
    if (/[_^]/.test(label)) {
      let myRe = /(.*?)([_^])(.)/g;
      let myArray;
      let lastIndex;
      while ((myArray = myRe.exec(label)) !== null) {
        lastIndex = myRe.lastIndex;
        let prefix = myArray[1];
        let sep = myArray[2];
        let suffix = myArray[3];
        if (prefix) {
          text.append("tspan").text(prefix);
        }
        text.append("tspan")
        .attr("baseline-shift", sep == "_" ? "sub" : "super")
        .style("font-size", "9px")
        .text(suffix);
      }
      if (label.substring(lastIndex)) {
        text.append("tspan").text(label.substring(lastIndex));
      }
    } else {
      text.append("tspan").text(label);
    }
    nodeGroup.classed(activeOrNotClass, true);
  }

  // Draw the node's canvas.
  let div = d3.select("#network").insert("div", ":first-child")
    .attr({
      "id": `canvas-${nodeId}`,
      "class": "canvas"
    })
    .style({
      position: "absolute",
      left: `${x + 3}px`,
      top: `${y + 3}px`
    })
    .on("mouseenter", function() {
      selectedNodeId = nodeId;
      div.classed("hovered", true);
      nodeGroup.classed("hovered", true);
      updateDecisionBoundary(network, false);
      heatMap.updateBackground(boundary[nodeId], state.discretize);
    })
    .on("mouseleave", function() {
      selectedNodeId = null;
      div.classed("hovered", false);
      nodeGroup.classed("hovered", false);
      updateDecisionBoundary(network, false);
      heatMap.updateBackground(boundary[nn.getOutputNode(network).id],
          state.discretize);
    });
  if (isInput) {
    div.on("click", function() {
      state[nodeId] = !state[nodeId];
      reset();
    });
    div.style("cursor", "pointer");
  }
  if (isInput) {
    div.classed(activeOrNotClass, true);
  }
  let nodeHeatMap = new HeatMap(RECT_SIZE, DENSITY / 10, xDomain,
      xDomain, div, {noSvg: true});
  div.datum({heatmap: nodeHeatMap, id: nodeId});

}

// Draw network
function drawNetwork(network: nn.Node[][]): void {
  let svg = d3.select("#svg");
  // Remove all svg elements.
  svg.select("g.core").remove();
  // Remove all div elements.
  d3.select("#network").selectAll("div.canvas").remove();
  d3.select("#network").selectAll("div.plus-minus-neurons").remove();

  // Get the width of the svg container.
  let padding = 3;
  let co = <HTMLDivElement> d3.select(".column.output").node();
  let cf = <HTMLDivElement> d3.select(".column.features").node();
  let width = co.offsetLeft - cf.offsetLeft;
  svg.attr("width", width);

  // Map of all node coordinates.
  let node2coord: {[id: string]: {cx: number, cy: number}} = {};
  let container = svg.append("g")
    .classed("core", true)
    .attr("transform", `translate(${padding},${padding})`);
  // Draw the network layer by layer.
  let numLayers = network.length;
  let featureWidth = 118;
  let layerScale = d3.scale.ordinal<number, number>()
      .domain(d3.range(1, numLayers - 1))
      .rangePoints([featureWidth, width - RECT_SIZE], 0.7);
  let nodeIndexScale = (nodeIndex: number) => nodeIndex * (RECT_SIZE + 25);


  let calloutThumb = d3.select(".callout.thumbnail").style("display", "none");
  let calloutWeights = d3.select(".callout.weights").style("display", "none");
  let idWithCallout = null;
  let targetIdWithCallout = null;

  // Draw the input layer separately.
  let cx = RECT_SIZE / 2 + 50;
  let nodeIds = Object.keys(INPUTS);
  let maxY = nodeIndexScale(nodeIds.length);
  nodeIds.forEach((nodeId, i) => {
    let cy = nodeIndexScale(i) + RECT_SIZE / 2;
    node2coord[nodeId] = {cx: cx, cy: cy};
    drawNode(cx, cy, nodeId, true, container);
  });

  // Draw the intermediate layers.
  for (let layerIdx = 1; layerIdx < numLayers - 1; layerIdx++) {
    let numNodes = network[layerIdx].length;
    let cx = layerScale(layerIdx) + RECT_SIZE / 2;
    maxY = Math.max(maxY, nodeIndexScale(numNodes));
    addPlusMinusControl(layerScale(layerIdx), layerIdx);
    for (let i = 0; i < numNodes; i++) {
      let node = network[layerIdx][i];
      let cy = nodeIndexScale(i) + RECT_SIZE / 2;
      node2coord[node.id] = {cx: cx, cy: cy};
      drawNode(cx, cy, node.id, false, container);

      // Show callout to thumbnails.
      let numNodes = network[layerIdx].length;
      let nextNumNodes = network[layerIdx + 1].length;
      if (idWithCallout == null &&
          i === numNodes - 1 &&
          nextNumNodes <= numNodes) {
        calloutThumb.style({
          display: null,
          top: `${20 + 3 + cy}px`,
          left: `${cx}px`
        });
        idWithCallout = node.id;
      }

      // Draw links.
      for (let j = 0; j < node.inputLinks.length; j++) {
        let link = node.inputLinks[j];
        let path: SVGPathElement = <any> drawLink(link, node2coord, network,
            container, j === 0, j, node.inputLinks.length).node();
        // Show callout to weights.
        let prevLayer = network[layerIdx - 1];
        let lastNodePrevLayer = prevLayer[prevLayer.length - 1];
        if (targetIdWithCallout == null &&
            i === numNodes - 1 &&
            link.source.id === lastNodePrevLayer.id &&
            (link.source.id !== idWithCallout || numLayers <= 5) &&
            link.dest.id !== idWithCallout &&
            prevLayer.length >= numNodes) {
          let midPoint = path.getPointAtLength(path.getTotalLength() * 0.7);
          calloutWeights.style({
            display: null,
            top: `${midPoint.y + 5}px`,
            left: `${midPoint.x + 3}px`
          });
          targetIdWithCallout = link.dest.id;
        }
      }
    }
  }

  // Draw the output node separately.
  cx = width + RECT_SIZE / 2;
  let node = network[numLayers - 1][0];
  let cy = nodeIndexScale(0) + RECT_SIZE / 2;
  node2coord[node.id] = {cx: cx, cy: cy};
  // Draw links.
  for (let i = 0; i < node.inputLinks.length; i++) {
    let link = node.inputLinks[i];
    drawLink(link, node2coord, network, container, i === 0, i,
        node.inputLinks.length);
  }
  // Adjust the height of the svg.
  svg.attr("height", maxY);

  // Adjust the height of the features column.
  let height = Math.max(
    getRelativeHeight(calloutThumb),
    getRelativeHeight(calloutWeights),
    getRelativeHeight(d3.select("#network"))
  );
  d3.select(".column.features").style("height", height + "px");
}

function getRelativeHeight(selection: d3.Selection<any>) {
  let node = <HTMLAnchorElement> selection.node();
  return node.offsetHeight + node.offsetTop;
}

function addPlusMinusControl(x: number, layerIdx: number) {
  let div = d3.select("#network").append("div")
    .classed("plus-minus-neurons", true)
    .style("left", `${x - 10}px`);

  let i = layerIdx - 1;
  let firstRow = div.append("div").attr("class", `ui-numNodes${layerIdx}`);
  firstRow.append("button")
      .attr("class", "mdl-button mdl-js-button mdl-button--icon")
      .on("click", () => {
        let numNeurons = state.networkShape[i];
        if (numNeurons >= 8) {
          return;
        }
        state.networkShape[i]++;
        reset();
      })
    .append("i")
      .attr("class", "material-icons")
      .text("add");

  firstRow.append("button")
      .attr("class", "mdl-button mdl-js-button mdl-button--icon")
      .on("click", () => {
        let numNeurons = state.networkShape[i];
        if (numNeurons <= 1) {
          return;
        }
        state.networkShape[i]--;
        reset();
      })
    .append("i")
      .attr("class", "material-icons")
      .text("remove");

  let suffix = state.networkShape[i] > 1 ? "s" : "";
  div.append("div").text(
    state.networkShape[i] + " neuron" + suffix
  );
}

function drawLink(
    input: nn.Link, node2coord: {[id: string]: {cx: number, cy: number}},
    network: nn.Node[][], container: d3.Selection<any>,
    isFirst: boolean, index: number, length: number) {
  let line = container.append("path");
  let source = node2coord[input.source.id];
  let dest = node2coord[input.dest.id];
  let datum = {
    source: {
      y: source.cx + RECT_SIZE / 2 + 2,
      x: source.cy
    },
    target: {
      y: dest.cx - RECT_SIZE / 2,
      x: dest.cy + ((index - (length - 1) / 2) / length) * 12
    }
  };
  let diagonal = d3.svg.diagonal().projection(d => [d.y, d.x]);
  line.attr({
    "marker-start": "url(#markerArrow)",
    class: "link",
    id: "link" + input.source.id + "-" + input.dest.id,
    d: diagonal(datum, 0)
  });
  return line;
}

/**
 * Given a neural network, it asks the network for the output (prediction)
 * of every node in the network using inputs sampled on a square grid.
 * It returns a map where each key is the node ID and the value is a square
 * matrix of the outputs of the network for each input in the grid respectively.
 */
function updateDecisionBoundary(network: nn.Node[][], firstTime: boolean) {
  if (firstTime) {
    boundary = {};
    nn.forEachNode(network, true, node => {
      boundary[node.id] = new Array(DENSITY);
    });
    // Go through all predefined inputs.
    for (let nodeId in INPUTS) {
      boundary[nodeId] = new Array(DENSITY);
    }
  }
  let xScale = d3.scale.linear().domain([0, DENSITY - 1]).range(xDomain);
  let yScale = d3.scale.linear().domain([DENSITY - 1, 0]).range(xDomain);

  let i = 0, j = 0;
  for (i = 0; i < DENSITY; i++) {
    if (firstTime) {
      nn.forEachNode(network, true, node => {
        boundary[node.id][i] = new Array(DENSITY);
      });
      // Go through all predefined inputs.
      for (let nodeId in INPUTS) {
        boundary[nodeId][i] = new Array(DENSITY);
      }
    }
    for (j = 0; j < DENSITY; j++) {
      // 1 for points inside the circle, and 0 for points outside the circle.
      let x = xScale(i);
      let y = yScale(j);
      let input = constructInput(x, y);
      nn.forwardProp(network, input);
      nn.forEachNode(network, true, node => {
        boundary[node.id][i][j] = node.output;
      });
      if (firstTime) {
        // Go through all predefined inputs.
        for (let nodeId in INPUTS) {
          boundary[nodeId][i][j] = INPUTS[nodeId].f(x, y);
        }
      }
    }
  }
}

function getLoss(network: nn.Node[][], dataPoints: Example2D[]): number {
  let loss = 0;
  for (let i = 0; i < dataPoints.length; i++) {
    let dataPoint = dataPoints[i];
    let input = constructInput(dataPoint.x, dataPoint.y);
    let output = nn.forwardProp(network, input);
    loss += nn.Errors.SQUARE.error(output, dataPoint.label);
  }
  return loss / dataPoints.length;
}

function updateUI(firstStep = false) {
  // Update the links visually.
  updateWeightsUI(network, d3.select("g.core"));
  // Get the decision boundary of the network.
  updateDecisionBoundary(network, firstStep);
  let selectedId = selectedNodeId != null ?
      selectedNodeId : nn.getOutputNode(network).id;
  heatMap.updateBackground(boundary[selectedId], state.discretize);

  // Update all decision boundaries.
  d3.select("#network").selectAll("div.canvas")
      .each(function(data: {heatmap: HeatMap, id: string}) {
    data.heatmap.updateBackground(reduceMatrix(boundary[data.id], 10),
        state.discretize);
  });

  function zeroPad(n: number): string {
    let pad = "000000";
    return (pad + n).slice(-pad.length);
  }

  function addCommas(s: string): string {
    return s.replace(/\B(?=(\d{3})+(?!\d))/g, ",");
  }

  function humanReadable(n: number): string {
    return n.toFixed(3);
  }

  // Update loss and iteration number.
  d3.select("#loss-train").text(humanReadable(lossTrain));
  d3.select("#loss-test").text(humanReadable(lossTest));
  d3.select("#iter-number").text(addCommas(zeroPad(iter)));
  lineChart.addDataPoint([lossTrain, lossTest]);
}

function constructInputIds(): string[] {
  let result: string[] = [];
  for (let inputName in INPUTS) {
    if (state[inputName]) {
      result.push(inputName);
    }
  }
  return result;
}

function constructInput(x: number, y: number): number[] {
  let input: number[] = [];
  for (let inputName in INPUTS) {
    if (state[inputName]) {
      input.push(INPUTS[inputName].f(x, y));
    }
  }
  return input;
}

function oneStep(): void {
  iter++;
  trainData.forEach((point, i) => {
    let input = constructInput(point.x, point.y);
    nn.forwardProp(network, input);
    nn.backProp(network, point.label, nn.Errors.SQUARE);
    if ((i + 1) % state.batchSize === 0) {
      nn.updateWeights(network, state.learningRate, state.regularizationRate);
    }
  });
  // Compute the loss.
  lossTrain = getLoss(network, trainData);
  lossTest = getLoss(network, testData);
  updateUI();
}

export function getOutputWeights(network: nn.Node[][]): number[] {
  let weights: number[] = [];
  for (let layerIdx = 0; layerIdx < network.length - 1; layerIdx++) {
    let currentLayer = network[layerIdx];
    for (let i = 0; i < currentLayer.length; i++) {
      let node = currentLayer[i];
      for (let j = 0; j < node.outputs.length; j++) {
        let output = node.outputs[j];
        weights.push(output.weight);
      }
    }
  }
  return weights;
}

function reset() {
  lineChart.reset();
  state.serialize();
  player.pause();

  let suffix = state.numHiddenLayers !== 1 ? "s" : "";
  d3.select("#layers-label").text("Hidden layer" + suffix);
  d3.select("#num-layers").text(state.numHiddenLayers);

  // Make a simple network.
  iter = 0;
  let numInputs = constructInput(0 , 0).length;
  let shape = [numInputs].concat(state.networkShape).concat([1]);
  let outputActivation = (state.problem == Problem.REGRESSION) ?
      nn.Activations.LINEAR : nn.Activations.TANH;
  network = nn.buildNetwork(shape, state.activation, outputActivation,
      state.regularization, constructInputIds());
  lossTrain = getLoss(network, trainData);
  lossTest = getLoss(network, testData);
  drawNetwork(network);
  updateUI(true);
};

function initTutorial() {
  if (state.tutorial == null) {
    return;
  }
  // Remove all other text.
  d3.selectAll("article div.l--body").remove();
  let tutorial = d3.select("article").append("div")
    .attr("class", "l--body");
  // Insert tutorial text.
  d3.html(`tutorials/${state.tutorial}.html`, (err, htmlFragment) => {
    if (err) {
      throw err;
    }
    (<any>tutorial.node()).appendChild(htmlFragment);
    // If the tutorial has a <title> tag, set the page title to that.
    let title = tutorial.select("title");
    if (title.size()) {
      d3.select("header h1").style({
        "margin-top": "20px",
        "margin-bottom": "20px",
      })
      .text(title.text());
      document.title = title.text();
    }
  });
}

function drawDatasetThumbnails() {
  function renderThumbnail(canvas, dataGenerator) {
    let w = 100;
    let h = 100;
    canvas.setAttribute("width", w);
    canvas.setAttribute("height", h);
    let context = canvas.getContext("2d");
    let data = dataGenerator(200, 0);
    data.forEach(function(d) {
      context.fillStyle = colorScale(d.label);
      context.fillRect(w * (d.x + 6) / 12, h * (d.y + 6) / 12, 4, 4);
    });
    d3.select(canvas.parentNode).style("display", null);
  }
  d3.selectAll(".dataset").style("display", "none");

  if (state.problem == Problem.CLASSIFICATION) {
    for (let dataset in datasets) {
      let canvas: any =
          document.querySelector(`canvas[data-dataset=${dataset}]`);
      let dataGenerator = datasets[dataset];
      renderThumbnail(canvas, dataGenerator);
    }
  }
  if (state.problem == Problem.REGRESSION) {
    for (let regDataset in regDatasets) {
      let canvas: any =
          document.querySelector(`canvas[data-regDataset=${regDataset}]`);
      let dataGenerator = regDatasets[regDataset];
      renderThumbnail(canvas, dataGenerator);
    }
  }
}

function hideControls() {
  // Set display:none to all the UI elements that are hidden.
  let hiddenProps = state.getHiddenProps();
  hiddenProps.forEach(prop => {
    let controls = d3.selectAll(`.ui-${prop}`);
    if (controls.size() == 0) {
      console.warn(`0 html elements found with class .ui-${prop}`);
    }
    controls.style("display", "none");
  });

  // Also add checkbox for each hidable control in the "use it in classrom"
  // section.
  let hideControls = d3.select(".hide-controls");
  HIDABLE_CONTROLS.forEach(([text, id]) => {
    let label = hideControls.append("label")
      .attr("class", "mdl-checkbox mdl-js-checkbox mdl-js-ripple-effect");
    let input = label.append("input")
      .attr({
        type: "checkbox",
        class: "mdl-checkbox__input",
      });
    if (hiddenProps.indexOf(id) == -1) {
      input.attr("checked", "true");
    }
    input.on("change", function() {
      state.setHideProperty(id, !this.checked);
      state.serialize();
      d3.select(".hide-controls-link")
        .attr("href", window.location.href);
    });
    label.append("span")
      .attr("class", "mdl-checkbox__label label")
      .text(text);
  });
  d3.select(".hide-controls-link")
    .attr("href", window.location.href);
}

function generateData(firstTime = false) {
  if (!firstTime) {
    // Change the seed.
    state.seed = Math.random().toFixed(5);
    state.serialize();
  }
  Math.seedrandom(state.seed);
  let numSamples = (state.problem == Problem.REGRESSION) ?
      NUM_SAMPLES_REGRESS : NUM_SAMPLES_CLASSIFY;
  let generator = state.problem == Problem.CLASSIFICATION ?
      state.dataset : state.regDataset;
  let data = generator(numSamples, state.noise / 100);
  // Shuffle the data in-place.
  shuffle(data);
  // Split into train and test data.
  let splitIndex = Math.floor(data.length * state.percTrainData / 100);
  trainData = data.slice(0, splitIndex);
  testData = data.slice(splitIndex);
  heatMap.updatePoints(trainData);
  heatMap.updateTestPoints(state.showTestData ? testData : []);
}

drawDatasetThumbnails();
initTutorial();
makeGUI();
generateData(true);
reset();
hideControls();