-
Notifications
You must be signed in to change notification settings - Fork 0
/
615dc2fbd22e0.xml
139 lines (42 loc) · 6.88 KB
/
615dc2fbd22e0.xml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
<?xml version="1.0" encoding="UTF-8"?><interview><metadata><model><id>nih-repotag</id><version>3</version><localization>en_US</localization><time>1633535902</time></model><!--Converted at: 1643843254103--></metadata><result status="Accept"><compound slot="NIHDSP"><compound slot="CitationSupport"><atomic ordinal="1" outOf="2" slot="DOI">supported</atomic><atomic ordinal="2" outOf="3" slot="MetadataLevel">full</atomic><atomic ordinal="2" outOf="3" slot="PID">generated</atomic></compound><aggregate slot="DataTypes"><value>clnTrl</value><value>cryst</value><value>cytom</value><value>em</value><value>gnmc</value><value>gnphn</value><value>gwas</value><value>img</value><value>intrpath</value><value>neurec</value><value>neustrct</value><value>nmrs</value><value>protstrct</value><value>prtmc</value><value>seq</value></aggregate><aggregate slot="Domain"><value>diadkd</value></aggregate><aggregate slot="Flags"><value>hasContactPerson</value></aggregate><atomic ordinal="0" outOf="2" slot="PHISupport">notSupported</atomic><compound slot="Restrictions"><atomic ordinal="0" outOf="2" slot="ApplicationRequired">no</atomic><atomic ordinal="0" outOf="3" slot="Costs">none</atomic><atomic ordinal="0" outOf="4" slot="FundingSource">Any</atomic><atomic ordinal="0" outOf="3" slot="SizeLimits">none</atomic></compound><atomic ordinal="0" outOf="2" slot="Versioning">notSupported</atomic></compound></result><transcript><question id="[decision-graph.dg]qApplication"><text><![CDATA[# Does the repository require depositors to go through an application process prior to depositing datasets?]]></text><answer>no</answer></question><question id="[decision-graph.dg]qSize"><text><![CDATA[# Does the repository impose size limits?
Some repositories place limits on the size of data that can be deposited. These limits may involve:
1. absolute limits, i.e., they will accept no dataset above a certain size;
2. relative limits, e.g., data above a certain size is subject to approval or perhaps additional costs;
3. submission limits, e.g., data above a certain size requires special arrangements for submission.
### Terms
* *contact*: Contact the repository management for depositing large datasets.
---
### 📝 Notes
Note any limits in the notes field]]></text><answer>no</answer></question><question id="[decision-graph.dg]qCost"><text><![CDATA[# Does depositing data involve costs to the depositor?
Sometimes there are conditions under which the depositor has to pay.
---
### 📝 Notes
Please add those conditions in the notes field.]]></text><answer>no</answer></question><question id="[decision-graph.dg]qVersioning"><text><![CDATA[# Does the repository support versioning?
Check whether there's a version number in the metadata, check policy for information, if they handle it as a new data submission then the answer is 'no' unless there's something clearly about the relationship between the different versions.]]></text><answer>no</answer></question><question id="[decision-graph.dg]qPhi"><text><]]></text><answer>no</answer></question><question id="[decision-graph.dg]qDomain"><text><![CDATA[# Does the repository focus on a specific domain?
Is there a specific biomedical discipline or subdiscipline this repository is serving such that if you're not working within the discipline you would not be depositing data. E.g. AMPT2D.
Note that __domain__ is different from __data type__ (e.g. genomics).]]></text><answer>yes</answer></question><question id="[decision-graph.dg]qDomainList"><text><![CDATA[# What is the repository's specific domain?
Select the domain. If it isn't in our list, select 'Other'.
---
### 📝 Notes
Please note the domain name in the notes field.]]></text><answer>Diabetes, Digestive and Kidney Diseases</answer></question><question id="[decision-graph.dg]qDataType"><text><![CDATA[# Does the repository store a single data type?
The repository is primarily built around a single type of data, e.g. imaging data although it may allow multiple types of imaging data. The repository also may allow supporting information that is of another data type.]]></text><answer>no</answer></question><question id="[decision-graph.dg]qContact"><text><![CDATA[# Does the repository supply a contact person?]]></text><answer>yes</answer></question><question id="[decision-graph.dg]qFundingSource"><text><![CDATA[# Does the repository require data to come from an NIH funded project?
### Terms
* *NIH*: US National Institutes of Health]]></text><answer>no</answer></question><question id="[decision-graph.dg]qPublised"><text><![CDATA[# Does the repository require datasets to support a published paper?
If there is no explicit statement that claims this, then we say no.]]></text><answer>no</answer></question><question id="[decision-graph.dg]qCitationMetadata"><text><![CDATA[# Does the repository make it easy to cite data?
For example, the repository provides a formatted data citation with each dataset.
### Terms
* *limited:* The repository presents formatted data citation that users can cut and paste
* *yes:* The repository can export Bibtex, or allows datasets to be imported into reference managers.]]></text><answer>yes</answer></question><question id="[decision-graph.dg]qPID"><text>< whether the repository has their prefix [registered](https://registry.identifiers.org/registry).
### Terms
* *PID:* Persistent IDendifier - a string or a number that uniquely identifies a dataset indefinitely.
* *Supports but does not generate:* The data repository has a specific field for storing a PID. However, the repository will not create a PID on its own; data depositors must supply one on themselves.]]></text><answer>supports and generates</answer></question><question id="[decision-graph.dg]qDOI"><text><.
---
### 📝 Notes
Add any information on the granularity of the DOI in the Notes Field, e.g., assigns DOIs at the study level but not at the individual experiment level.]]></text><answer>yes</answer></question></transcript></interview>