From dcc8fda4590b2245caf618ff1d2da69d8c30310f Mon Sep 17 00:00:00 2001 From: DianaSpurite <112383244+DianaSpurite@users.noreply.github.com> Date: Thu, 28 Sep 2023 15:01:12 +0200 Subject: [PATCH] Update ancientsinglegenome-hostassociated_libraries.tsv Correcting library_Polymerase --- ...tsinglegenome-hostassociated_libraries.tsv | 40 +++++++++---------- 1 file changed, 20 insertions(+), 20 deletions(-) diff --git a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv index aaa466427..ddeb0e063 100644 --- a/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv +++ b/ancientsinglegenome-hostassociated/libraries/ancientsinglegenome-hostassociated_libraries.tsv @@ -2808,26 +2808,26 @@ Caruana2023 2023 10.1007/s13313-023-00936-6 Cueva_de_los_Lagos-Tooth ENA PRJEB23 Caruana2023 2023 10.1007/s13313-023-00936-6 Cueva_de_los_Lagos-Tooth ENA PRJEB23467 ERS2059523 unspecified double AmpliTaq Gold DNA none HiSeq X Ten SINGLE Unknown 1164531241 ERR2225784 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/004/ERR2225784/ERR2225784.fastq.gz d028912fb20f3a5c731406ad82d2e363 48849563848 Caruana2023 2023 10.1007/s13313-023-00936-6 Yámana-Tooth ENA PRJEB24629 ERS2160137 unspecified double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 808299942 ERR2270785 fastq_all ftp://ftp.sra.ebi.ac.uk/vol1/run/ERR227/ERR2270785/IPY10.All.fastq.gz 3c32116386822aa24ff2efa67e5d2e94 45202276574 Caruana2023 2023 10.1007/s13313-023-00936-6 Vác-Mummy-Tissue ENA PRJEB7454 ERS563409 92-A1 double Unknown none Illumina MiSeq PAIRED WGS 20084713 ERR651004 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_1.fastq.gz;ftp.sra.ebi.ac.uk/vol1/fastq/ERR651/ERR651004/ERR651004_2.fastq.gz 3f07d29738185963f380f637b9b93065;0d96c823b7998af0b2165fe46b7e542e 2984512816;3476815638 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_10 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 75660984 ERR966295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966295/ERR966295.fastq.gz 3f43def0d896afea489f3c5fccea36c3 3930297733 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_11 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 103486178 ERR966296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966296/ERR966296.fastq.gz b514bc662c122adb6ac42d5acf3b05f0 5330914571 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_13 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 285814147 ERR966298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966298/ERR966298.fastq.gz dc75bf256f29ebbd70954d7bd7ab2c9a 16162263061 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_6 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 30343646 ERR966310 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966310/ERR966310.fastq.gz 6efffec6ad1d62ed52e2cc3d3c5a7f43 1416897788 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_8 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 87962797 ERR966312 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966312/ERR966312.fastq.gz 5ceca13c5c30374209d7ea44e40de87c 4175899212 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_12 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 107286297 ERR966297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966297/ERR966297.fastq.gz ec6261bc595a0d84a6606143492f91ec 5571578708 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_15 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 40472562 ERR966300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966300/ERR966300.fastq.gz 600dc595ac8de4fe232ca1c00c456fec 2368473624 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_17 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 86611474 ERR966302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966302/ERR966302.fastq.gz 1d2c52049d8c8302e8d45b83c2ce7f4f 5140536631 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_2 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 58022324 ERR966305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966305/ERR966305.fastq.gz 9350277d1aafa8c43cec850f9e38f0e1 2756025719 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_20 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 136573362 ERR966306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966306/ERR966306.fastq.gz 98688aecf3d8b0969298d39010220e23 6672345221 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_3 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 49940208 ERR966307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966307/ERR966307.fastq.gz ff03f2f79b3c528eb1c98af05a3fad62 2423386088 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_4 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 26872695 ERR966308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966308/ERR966308.fastq.gz 2557624cd4bd5e82ac3e32fc8fa4ed85 1254939750 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_7 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 94822961 ERR966311 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966311/ERR966311.fastq.gz 871dbd8cd245d22c9cdabc166b9118e5 4496790226 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_1 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 49502893 ERR966294 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966294/ERR966294.fastq.gz a808f03060305f2523287cf004fa29fc 2350014565 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_14 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 23206451 ERR966299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966299/ERR966299.fastq.gz 4139f9e28a3f01f79f1e8fc6163342ef 1361039728 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_16 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 25867706 ERR966301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966301/ERR966301.fastq.gz 142744b3e9bb59d960fb7959e5cadd24 1522488144 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_18 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 100755898 ERR966303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966303/ERR966303.fastq.gz 66be0bbef7e8660498b971e19236b005 5975543012 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_19 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 85601752 ERR966304 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966304/ERR966304.fastq.gz 2377b397bc7659809ba3a3b58c9abdda 5175038658 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_5 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 47945651 ERR966309 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966309/ERR966309.fastq.gz d27e80a6d72a4e6c366a4481847639df 2206834714 -Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_9 double AmpliTaq Gold none Illumina HiSeq 2000 SINGLE WGS 98694708 ERR966313 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966313/ERR966313.fastq.gz 9cfcbea3b01094ef1ab7b0bd30f84c5a 4681565044 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_10 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 75660984 ERR966295 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966295/ERR966295.fastq.gz 3f43def0d896afea489f3c5fccea36c3 3930297733 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_11 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 103486178 ERR966296 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966296/ERR966296.fastq.gz b514bc662c122adb6ac42d5acf3b05f0 5330914571 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_13 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 285814147 ERR966298 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966298/ERR966298.fastq.gz dc75bf256f29ebbd70954d7bd7ab2c9a 16162263061 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_6 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 30343646 ERR966310 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966310/ERR966310.fastq.gz 6efffec6ad1d62ed52e2cc3d3c5a7f43 1416897788 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_8 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 87962797 ERR966312 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966312/ERR966312.fastq.gz 5ceca13c5c30374209d7ea44e40de87c 4175899212 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_12 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 107286297 ERR966297 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966297/ERR966297.fastq.gz ec6261bc595a0d84a6606143492f91ec 5571578708 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_15 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 40472562 ERR966300 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966300/ERR966300.fastq.gz 600dc595ac8de4fe232ca1c00c456fec 2368473624 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_17 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 86611474 ERR966302 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966302/ERR966302.fastq.gz 1d2c52049d8c8302e8d45b83c2ce7f4f 5140536631 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_2 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 58022324 ERR966305 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966305/ERR966305.fastq.gz 9350277d1aafa8c43cec850f9e38f0e1 2756025719 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_20 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 136573362 ERR966306 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966306/ERR966306.fastq.gz 98688aecf3d8b0969298d39010220e23 6672345221 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_3 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 49940208 ERR966307 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966307/ERR966307.fastq.gz ff03f2f79b3c528eb1c98af05a3fad62 2423386088 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_4 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 26872695 ERR966308 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966308/ERR966308.fastq.gz 2557624cd4bd5e82ac3e32fc8fa4ed85 1254939750 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_7 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 94822961 ERR966311 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966311/ERR966311.fastq.gz 871dbd8cd245d22c9cdabc166b9118e5 4496790226 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_1 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 49502893 ERR966294 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966294/ERR966294.fastq.gz a808f03060305f2523287cf004fa29fc 2350014565 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_14 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 23206451 ERR966299 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966299/ERR966299.fastq.gz 4139f9e28a3f01f79f1e8fc6163342ef 1361039728 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_16 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 25867706 ERR966301 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966301/ERR966301.fastq.gz 142744b3e9bb59d960fb7959e5cadd24 1522488144 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_18 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 100755898 ERR966303 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966303/ERR966303.fastq.gz 66be0bbef7e8660498b971e19236b005 5975543012 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_19 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 85601752 ERR966304 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966304/ERR966304.fastq.gz 2377b397bc7659809ba3a3b58c9abdda 5175038658 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_5 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 47945651 ERR966309 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966309/ERR966309.fastq.gz d27e80a6d72a4e6c366a4481847639df 2206834714 +Caruana2023 2023 10.1007/s13313-023-00936-6 Chinchorro-Mummy-Bone ENA PRJEB9733 ERS793932 Chinchorro_9 double AmpliTaq Gold DNA none Illumina HiSeq 2000 SINGLE WGS 98694708 ERR966313 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966313/ERR966313.fastq.gz 9cfcbea3b01094ef1ab7b0bd30f84c5a 4681565044 Caruana2023 2023 10.1007/s13313-023-00936-6 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libUpp.BC28 double Unknown none Illumina HiSeq 2000 SINGLE WGS 11472673 ERR966440 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966440/ERR966440.fastq.gz 28855b18583116ffa22e1f40fd963278 694295918 Caruana2023 2023 10.1007/s13313-023-00936-6 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libCAGCTA.BC28 double Unknown none Illumina HiSeq 2000 SINGLE WGS 50343799 ERR966426 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966426/ERR966426.fastq.gz 88d4a682975953ad845683f12590a1d3 2888163703 Caruana2023 2023 10.1007/s13313-023-00936-6 Pericues-BC28-Bone ENA PRJEB9733 ERS793942 libUpp.BC28 double Unknown none Illumina HiSeq 2000 SINGLE WGS 3444716 ERR966430 fastq_all ftp.sra.ebi.ac.uk/vol1/fastq/ERR966/ERR966430/ERR966430.fastq.gz 075f7fe98e6ec5cde875bf670cb49c47 201382661