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Implement API endpoints for other dataprovider functionality #1

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davmlaw opened this issue Feb 9, 2022 · 0 comments
Open

Implement API endpoints for other dataprovider functionality #1

davmlaw opened this issue Feb 9, 2022 · 0 comments

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@davmlaw
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davmlaw commented Feb 9, 2022

These are client calls:

    def get_acs_for_protein_seq(self, seq):
        raise NotImplementedError()

    def get_gene_info(self, gene):
        raise NotImplementedError()

    def get_pro_ac_for_tx_ac(self, tx_ac):
        raise NotImplementedError()

    def get_similar_transcripts(self, tx_ac):
        raise NotImplementedError()

    def get_tx_for_gene(self, gene):
        # TODO: We could build this from JSON pretty easily
        raise NotImplementedError()

    def get_tx_for_region(self, alt_ac, alt_aln_method, start_i, end_i):
        # TODO: This would be hard to do in Redis but we could do via HTSeq
        raise NotImplementedError()
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