README.md

modys-at-home

This project contains:

• 1 main MATLAB script: MODYSathome_main.m
• 12 MATLAB functions:
  • function_calc_mean_recall_precision.m
  • function_create_dataframes.m
  • function_deep_learning.m
  • function_determine_best_ML_model.m
  • function_display_DL_results.m
  • function_display_ML_results.m
  • function_index_extremities.m
  • function_machine_learning.m
  • function_oversample.m
  • function_partition_data.m
  • function_pick_best_models.m
  • function_prepare_DL_data.m

Downloading data

• Download the zip file via https://zenodo.org/record/6379451#.Yjs1uHrMK5c
• Unzip the zip file
• Each folder should have a file 'load_preprocessed_data_PatientXXX' in the correspinding folder data/PatientXXX containing the preprocessed data

STEPS

1. Open MATLAB
2. In MATLAB, go to the 'HOME' tab and click on 'Set Path'
3. Click on 'Add Folder' and browse to MODYS/Matlab Code/functions
4. Click on 'Select Folder' and click on 'Save'
5. Click on 'Browse to folder' and browse to a patients' data in MODYS/data/PatientXXX, then click on 'Select Folder'
6. In the 'HOME' tab click on 'Open' and open MODYSathome.m in MODYS/Matlab code
7. In the 'EDITOR' tab click on 'Run Section' to run the script
8. When the code has been run, the results are displayed in the Command Window and saved in MODYS/results/PatientXXX