From 4f774993ec59d78c737b9a9356f38e50b916f8d3 Mon Sep 17 00:00:00 2001
From: Nathan Yee <nyee@mit.edu>
Date: Tue, 28 Feb 2017 15:41:33 -0500
Subject: [PATCH] Fixes for Birad_recombination

-Remove groups Cd_rad_out and Cdpri_rad_out and all their children because their valence is overspecified when taking into account the bond to the backbone
---
 .../families/Birad_recombination/groups.py    | 96 -------------------
 1 file changed, 96 deletions(-)

diff --git a/input/kinetics/families/Birad_recombination/groups.py b/input/kinetics/families/Birad_recombination/groups.py
index efe02b3671..4b38724f8e 100644
--- a/input/kinetics/families/Birad_recombination/groups.py
+++ b/input/kinetics/families/Birad_recombination/groups.py
@@ -451,50 +451,6 @@
     kinetics = None,
 )
 
-entry(
-    index = 84,
-    label = "Cd_rad_out",
-    group = 
-"""
-1 *1 Cdd       u1 {2,D}
-2    [C,O,S] u0 {1,D}
-""",
-    kinetics = None,
-)
-
-entry(
-    index = 31,
-    label = "Cd_rad_out_C",
-    group = 
-"""
-1 *1 Cdd u1 {2,D}
-2    C u0 {1,D}
-""",
-    kinetics = None,
-)
-
-entry(
-    index = 32,
-    label = "Cd_rad_out_O",
-    group = 
-"""
-1 *1 Cdd u1 {2,D}
-2    O u0 {1,D}
-""",
-    kinetics = None,
-)
-
-entry(
-    index = 33,
-    label = "Cd_rad_out_S",
-    group = 
-"""
-1 *1 Cdd u1 {2,D}
-2    S u0 {1,D}
-""",
-    kinetics = None,
-)
-
 entry(
     index = 34,
     label = "Cdsingle_rad_out",
@@ -763,50 +719,6 @@
     kinetics = None,
 )
 
-entry(
-    index = 57,
-    label = "Cdpri_rad_out",
-    group = 
-"""
-1 *2 Cdd       u1 {2,D}
-2    [C,O,S] u0 {1,D}
-""",
-    kinetics = None,
-)
-
-entry(
-    index = 58,
-    label = "Cdpri_rad_out_C",
-    group = 
-"""
-1 *2 Cdd u1 {2,D}
-2    C u0 {1,D}
-""",
-    kinetics = None,
-)
-
-entry(
-    index = 59,
-    label = "Cdpri_rad_out_O",
-    group = 
-"""
-1 *2 Cdd u1 {2,D}
-2    O u0 {1,D}
-""",
-    kinetics = None,
-)
-
-entry(
-    index = 60,
-    label = "Cdpri_rad_out_S",
-    group = 
-"""
-1 *2 Cdd u1 {2,D}
-2    S u0 {1,D}
-""",
-    kinetics = None,
-)
-
 entry(
     index = 61,
     label = "Cdsinglepri_rad_out",
@@ -1088,10 +1000,6 @@
 L1: Y_rad_out
     L2: O_rad
     L2: S_rad
-    L2: Cd_rad_out
-        L3: Cd_rad_out_O
-        L3: Cd_rad_out_S
-        L3: Cd_rad_out_C
     L2: Cdsingle_rad_out
         L3: CdsingleDe_rad_out
         L3: CdsingleND_rad_out
@@ -1120,10 +1028,6 @@
         L3: CdsinglepriH_rad_out
         L3: CdsinglepriND_rad_out
         L3: CdsinglepriDe_rad_out
-    L2: Cdpri_rad_out
-        L3: Cdpri_rad_out_O
-        L3: Cdpri_rad_out_S
-        L3: Cdpri_rad_out_C
     L2: Cpri_rad_out_single
         L3: Cpri_rad_out_noH
             L4: Cpri_rad_out_NonDe