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The connection would either drop or the file would appear to be downloaded but would not uncompress because of an unexpected end of file (similar to this issue).
I ran the following command to download the file locally but the result was the same:
Then I ran the same command on the EBI cluster. It worked almost instantly and the file was fine.
This problem must have something to do with network timing out when the connection is not very fast or with the way the files are streamed by the django export app. Alternatively, it could have something to do with the load balancer or some k8s configs.
@carlosribas please don't look at this until you are back from 🌴!
The text was updated successfully, but these errors were encountered:
One of the users experienced a problem downloading a ~200Mb fasta file (389,619 sequences) with text search results:
https://rnacentral.org/export/results?job=6bf68ffd-e38f-403d-bccb-d5e0eef45dd3
The connection would either drop or the file would appear to be downloaded but would not uncompress because of an unexpected end of file (similar to this issue).
I ran the following command to download the file locally but the result was the same:
kubectl cp prod/rnacentral-<pod-id>:/srv/rnacentral/export/6bf68ffd-e38f-403d-bccb-d5e0eef45dd3.fasta.gz lncrnas.fa.gz
Then I ran the same command on the EBI cluster. It worked almost instantly and the file was fine.
This problem must have something to do with network timing out when the connection is not very fast or with the way the files are streamed by the django
export
app. Alternatively, it could have something to do with the load balancer or some k8s configs.@carlosribas please don't look at this until you are back from 🌴!
The text was updated successfully, but these errors were encountered: