.pre-commit-config.yaml

fail_fast: true

repos:
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v4.4.0
    hooks:
      - id: check-added-large-files
        exclude: (.*?)\.(h5)$
      - id: check-case-conflict
      - id: check-json
      - id: pretty-format-json
        args:
          - "--autofix"
          - "--indent=2"
          - "--no-sort-keys"
      - id: check-toml
      - id: check-xml
      - id: check-yaml
      - id: debug-statements
      - id: detect-aws-credentials
        args:
          - "--allow-missing-credentials"
      - id: detect-private-key
      - id: end-of-file-fixer
      - id: mixed-line-ending
        args: ["--fix=lf"]
        description: Forces to replace line ending by the UNIX 'lf' character.
      - id: trailing-whitespace
        exclude: ".bumpversion.cfg"
      - id: check-merge-conflict

  - repo: https://github.com/psf/black
    rev: "23.3.0"
    hooks:
      - id: black
        language_version: python3.9
        exclude: |
          (?x)(
            ^src\/polus\/plugins\/_plugins\/models\/pydanticv1\/\w*Schema.py$|
            ^src\/polus\/plugins\/_plugins\/models\/pydanticv2\/\w*Schema.py$
          )

  - repo: https://github.com/charliermarsh/ruff-pre-commit
    # Ruff version.
    rev: "v0.0.274"
    hooks:
      - id: ruff
        exclude: |
          (?x)(
            test_[a-zA-Z0-9]+.py$|
            ^src\/polus\/plugins\/_plugins\/models\/pydanticv1\/\w*Schema.py$|
            ^src\/polus\/plugins\/_plugins\/models\/pydanticv2\/\w*Schema.py$
          )
        args: [--fix]

  - repo: https://github.com/pre-commit/mirrors-mypy
    rev: "v1.4.0"
    hooks:
      - id: mypy
        exclude: |
          (?x)(
            test_[a-zA-Z0-9]+.py$|
            ^src\/polus\/plugins\/_plugins\/models\/pydanticv1\/\w*Schema.py$|
            ^src\/polus\/plugins\/_plugins\/models\/pydanticv2\/\w*Schema.py$
          )
        additional_dependencies: [types-requests==2.31.0.1]