journal.toml

[settings.pika]
host = "localhost"
timeout = 1

[settings.flask]
port = 9000
debug = true

[environment.variables]  # strings??
site_root = "/"
root_mold_id = "nunja.molds/html5"
asset_root = "/assets/"
artifact_root = "/artifact/"

[environment.paths]
document_root = "src/physiome/journal/pages"
generated_root = "/tmp/site/journal"

[metadata.paths]
generated_root = "/tmp/metadata/journal"

# Repodono system variables and objects?

[environment.variables.resource_map]
"abi-hc-rgb.png" = "physiome.journal.molds/original_template/images/abi-hc-rgb.png"
"associated-branding.png" = "physiome.journal.molds/original_template/images/associated-branding.png"
"CurationAndSubmissionFlow.png" = "physiome.journal.molds/original_template/images/CurationAndSubmissionFlow.png"
"ds-logo-bw.png" = "physiome.journal.molds/original_template/images/ds-logo-bw.png"
"Fulltext_button.svg" = "physiome.journal.molds/original_template/images/Fulltext_button.svg"
"Horizonal_Online.png" = "physiome.journal.molds/original_template/images/Horizonal_Online.png"
"iups.svg" = "physiome.journal.molds/original_template/images/iups.svg"
"Physiome-beside-middle.png" = "physiome.journal.molds/original_template/images/Physiome-beside-middle.png"
"Physiome-beside.png" = "physiome.journal.molds/original_template/images/Physiome-beside.png"
"PMR_button.svg" = "physiome.journal.molds/original_template/images/PMR_button.svg"
"Run_button.svg" = "physiome.journal.molds/original_template/images/Run_button.svg"

[environment.variables.styles]
"style.css" = "physiome.journal:styles.min.css"
[environment.variables.scripts]
# "bundle.js" = "physiome.journal:webpack.js"

[environment.variables.css_class]
table = 'pure-table'

[[environment.objects]]
__name__ = "artifact_map"
__init__ = "repodono.model.base:FlatGroupedMapping"
mappings = ["styles", "scripts"]

[[environment.objects]]
__name__ = "jinja_renderer"
__init__ = "repodono.nunja.render:JinjaRenderer"

[[environment.objects]]
__name__ = "nunja_renderer"
__init__ = "repodono.nunja.render:NunjaRenderer"

[[environment.objects]]
__name__ = "mold_data_provider"
__init__ = "repodono.nunja.render:MoldDataProvider"
mapping = "resource_map"

[[environment.objects]]
__name__ = "artifact_provider"
__init__ = "repodono.nunja.render:ArtifactProvider"
mapping = "artifact_map"

[default.variables]
nunja_part_data = {}

# layout of the system (probably does not belong as part of environment)

[bucket._]
__roots__ = ["generated_root"]
accept = ["*/*"]

# assets/artifacts resource and endpoint definitions
[[resource."/assets/{filename}"]]
__name__ = "mold_data_resource"
__call__ = "mold_data_provider"
filename = "filename"
[endpoint._."/assets/{filename}"]
__provider__ = "mold_data_resource"

[[resource."/artifact/{filename}"]]
__name__ = "artifact_resource"
__call__ = "artifact_provider"
filename = "filename"
[endpoint._."/artifact/{filename}"]
__provider__ = "artifact_resource"

# markdown

[[resource."/"]]
# instances of this will be modified, so it must be defined per resource
__name__ = "markdown"
__init__ = "markdown:Markdown"
extensions = ["'meta'"]

[[resource."/"]]
__name__ = "page_loader"
__init__ = "repodono.task.root:FilterFextRoot"
root = "document_root"
fext_filters = [
    ["'.md'", "markdown.convert"]
]

# nunja stuff
# TODO reorganise these stubs at some point

[[resource."/"]]
__name__ = "nunja_page"
__call__ = "nunja_renderer"
mold_id = "root_mold_id"
data.css = "styles"
data.js = "scripts"
data.title = "nunja_full_title"
data.body = "nunja_part"
data.artifact_root = "artifact_root"
data.asset_root = "asset_root"

[[resource."/"]]
__name__ = "nunja_page_part"
__call__ = "nunja_renderer.render"
mold_id = "nunja_part_mold_id"
data = "nunja_part_data"

[[resource."/"]]
__name__ = "nunja_index_part"
__call__ = "nunja_renderer.render_template"
mold_id_template = "'physiome.journal.molds/original_template/index.nja'"
data = "nunja_part_data"

# jinja via nunja

[[resource."/"]]
__name__ = "std_jinja_template_loader"
__call__ = "jinja_renderer.load_template"
template_id = "template_id"

[[resource."/"]]
__name__ = "std_jinja_template"
__call__ = "std_jinja_template_loader.prerender"

__nunja_base_jinja__ = "'nunja.tmpl/builtin/html5.nja'"
__nunja_js_prefix__ = "'/artifact/'"
__nunja_css_prefix__ = "'/artifact/'"
css_src = "styles"
js_src = "scripts"

# preset pages for the journal

[[resource."/{page}"]]
__name__ = "raw_page"
__call__ = "page_loader.text"
target = "page"

[[resource."/{page}"]]
__name__ = "jinja_page"
__call__ = "std_jinja_template"
content = "raw_page"
asset_root = "asset_root"
title = "page"

[localmap."/"]
nunja_part_data = "data"
nunja_part = "nunja_index_part"
data.site_root = "site_root"
data.asset_root = "asset_root"

# [endpoint._."/"]
# __provider__ = "nunja_page"
# __root__ = "generated_root"
# __filename__ = "index.html"
# nunja_part_mold_id = "physiome.journal.molds/original_template"
# nunja_full_title = "Physiome Journal - Home"

[[resource."/"]]
__name__ = "jinja_page"
__call__ = "std_jinja_template"
asset_root = "asset_root"
title = "title"

[endpoint._."/"]
__provider__ = "jinja_page"
__root__ = "generated_root"
__filename__ = "index.html"
template_id = "physiome.journal.templates/main/index.nja"
title = "Home"

[localmap."/{page}"]
nunja_part_data = "data"
nunja_part = "nunja_page_part"
data.content = "raw_page"
data.site_root = "site_root"
data.asset_root = "asset_root"

# [endpoint._."/{page}"]
# __provider__ = "nunja_page"
# __root__ = "generated_root"
# __filename__ = "index.html"
# nunja_part_mold_id = "physiome.journal.molds/original_template"
# # TODO figure out how to override this from the slugs
# nunja_full_title = "Physiome Journal"

[endpoint._."/{page}"]
__provider__ = "jinja_page"
__root__ = "generated_root"
__filename__ = "index.html"
template_id = "physiome.journal.templates/main/template.nja"
# TODO figure out how to override this from the slugs