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DESCRIPTION
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Package: DelayedMatrixStats
Type: Package
Title: Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects
Version: 1.29.1
Date: 2025-01-09
Authors@R: c(person("Peter", "Hickey", role = c("aut", "cre"),
email = "[email protected]", comment = c(ORCID = "0000-0002-8153-6258")),
person("Hervé", "Pagès", role = "ctb", email = "[email protected]"),
person("Aaron", "Lun", role = "ctb", email = "[email protected]"))
Description: A port of the 'matrixStats' API for use with DelayedMatrix objects
from the 'DelayedArray' package. High-performing functions operating on rows
and columns of DelayedMatrix objects, e.g. col / rowMedians(),
col / rowRanks(), and col / rowSds(). Functions optimized per data type and
for subsetted calculations such that both memory usage and processing time is
minimized.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
MatrixGenerics (>= 1.15.1),
DelayedArray (>= 0.31.7)
Imports:
methods,
sparseMatrixStats (>= 1.13.2),
Matrix (>= 1.5-0),
S4Vectors (>= 0.17.5),
IRanges (>= 2.25.10),
SparseArray (>= 1.5.19)
Suggests:
testthat,
knitr,
rmarkdown,
BiocStyle,
microbenchmark,
profmem,
HDF5Array,
matrixStats (>= 1.0.0)
VignetteBuilder: knitr
URL: https://github.com/PeteHaitch/DelayedMatrixStats
BugReports: https://github.com/PeteHaitch/DelayedMatrixStats/issues
biocViews: Infrastructure, DataRepresentation, Software