diff --git a/wdl-ci.config.json b/wdl-ci.config.json
index aac5c05..28950d1 100644
--- a/wdl-ci.config.json
+++ b/wdl-ci.config.json
@@ -2396,6 +2396,7 @@
                 ],
                 "ref_fasta": "${ref_fasta}",
                 "ref_index": "${ref_index}",
+                "ref_name": "${ref_name}",
                 "out_prefix": "HG002.GRCh38.structural_variants",
                 "runtime_attributes": "${default_runtime_attributes}"
               },
@@ -2436,6 +2437,7 @@
                 ],
                 "ref_fasta": "${ref_fasta}",
                 "ref_index": "${ref_index}",
+                "ref_name": "${ref_name}",
                 "out_prefix": "HG002-trio.joint.GRCh38.structural_variants",
                 "runtime_attributes": "${default_runtime_attributes}"
               },
diff --git a/workflows/joint/joint.wdl b/workflows/joint/joint.wdl
index dac4570..292ad78 100644
--- a/workflows/joint/joint.wdl
+++ b/workflows/joint/joint.wdl
@@ -82,6 +82,7 @@ workflow joint {
       aligned_bam_indices = aligned_bam_indices,
       ref_fasta           = ref_map["fasta"],                                      # !FileCoercion
       ref_index           = ref_map["fasta_index"],                                # !FileCoercion
+      ref_name            = ref_map["name"],
       out_prefix          = "~{family_id}.joint.~{ref_map['name']}.structural_variants",
       runtime_attributes  = default_runtime_attributes
   }
diff --git a/workflows/upstream/upstream.wdl b/workflows/upstream/upstream.wdl
index 5f987b4..32fb5b6 100644
--- a/workflows/upstream/upstream.wdl
+++ b/workflows/upstream/upstream.wdl
@@ -194,6 +194,7 @@ workflow upstream {
         aligned_bam_indices = [aligned_bam_index],
         ref_fasta           = ref_map["fasta"],                                      # !FileCoercion
         ref_index           = ref_map["fasta_index"],                                # !FileCoercion
+        ref_name            = ref_map["name"],
         out_prefix          = "~{sample_id}.~{ref_map['name']}.structural_variants",
         runtime_attributes  = default_runtime_attributes
     }
diff --git a/workflows/wdl-common b/workflows/wdl-common
index 26d0aa7..85edc84 160000
--- a/workflows/wdl-common
+++ b/workflows/wdl-common
@@ -1 +1 @@
-Subproject commit 26d0aa7f8c19a6458b56eb8c4111f77dbb20d166
+Subproject commit 85edc845635a876fd59ef360f1a6efd401428b9a