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Formatting of computed signature clusters has failed #14

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lptolik opened this issue Mar 22, 2021 · 0 comments
Open

Formatting of computed signature clusters has failed #14

lptolik opened this issue Mar 22, 2021 · 0 comments

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@lptolik
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lptolik commented Mar 22, 2021

I've been following the Computing signature clusters tutorial. The computational part finished properly:
$ p3-related-by-clusters --col=1 --gs1 CoNS.tbl --gs2 cmpBoth.tbl --sz1 20 --sz2 20 --min 0.8 --max 0.1 --iterations 3 --output CoNS.cls
Processing iteration 0.
29 families found.
Processing iteration 1.
28 families found.
Processing iteration 2.
41 families found.
Processing pair counts.

When I've tried to format the output:

p3-format-results -d CoNS.cls | p3-aggregates-to-html >clusters.html

I've got two errors:

-bash: p3-aggregates-to-html: command not found
FAILED with code -1: p3-aggregate-sss -d CoNS.cls at /Applications/PATRIC.app/deployment/lib/SeedUtils.pm line 2718.

MacOS 10.15.7, PATRIC CLI 1.034

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