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source info for synonyms #185

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mtholder opened this issue Feb 2, 2016 · 3 comments
Closed

source info for synonyms #185

mtholder opened this issue Feb 2, 2016 · 3 comments
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@mtholder
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mtholder commented Feb 2, 2016

I was trying to troubleshoot: OpenTreeOfLife/feedback#194

In my copy of the ott2.9draft12 dir:

$ grep -r Osteichthyes .
./synonyms.tsv:Osteichthyes |   773483  |       |   Osteichthyes (synonym for Actinopterygii)   |   

which makes it hard (for me) to tell where that synonymy is coming from.

@jar398
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jar398 commented Feb 3, 2016

Yes, this deficiency was mentioned in a comment on #113 . #113 and this issue should be done together since they share about 99% of their implementation.

@jar398
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jar398 commented Apr 30, 2016

Fixed in commit 42cff74 (amendments branch). There is now (2.10draft2) a 'source' column that tells you where the synonym came from.

@jar398 jar398 self-assigned this Jun 27, 2016
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jar398 commented Oct 6, 2016

See OpenTreeOfLife/taxomachine#142

@jar398 jar398 closed this as completed Oct 6, 2016
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