ot-base not recognized

[josephwb]

I tried to update ot-base, but got the following error:

./push.sh -c ../../deployed-systems/development/devapi.config ot-base
host=ot10.opentreeoflife.org, admin=admin, pem=/Users/josephwb/.ssh/opentree/opentree.pem, controller=josephwb, command=ot-base
Syncing
as-admin.sh                                                                100% 7532     7.4KB/s   00:00    
Error: Unrecognized command, or component not in OPENTREE_COMPONENTS: ot-base

This is odd, as ot-base is present in "devapi.config":

...
opentree_branch phylesystem-api master
opentree_branch oti master
opentree_branch treemachine reducelogging
opentree_branch taxomachine master
opentree_branch ot-base master
...

I updated treemachine, and with it ot-base was updated. So, it definitely knows about ot-base, it just cannot be updated on its own.

[jimallman]

This is not among the recognized commands in push.sh, so it's being rejected. We can add ot-base to support its standalone deployment, but we'll need to refactor the existing scripts to isolate those steps.