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CI

CI #409

Workflow file for this run

# source: https://github.com/invenia/PkgTemplates.jl/blob/master/.github/workflows/CI.yml
name: CI
# Run on master, tags, or any pull request
on:
schedule:
- cron: '0 2 * * *' # Daily at 2 AM UTC (8 PM CST)
push:
branches: [main]
tags: ["*"]
pull_request:
jobs:
test:
name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
version:
- "1"
- "1.9"
os:
- ubuntu-latest
- macOS-latest
- windows-latest
arch:
- x64
steps:
- uses: actions/checkout@v2
- uses: julia-actions/setup-julia@v1
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
- uses: actions/cache@v2
env:
cache-name: cache-artifacts
with:
path: ~/.julia/artifacts
key: ${{ runner.os }}-${{ matrix.arch }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
restore-keys: |
${{ runner.os }}-${{ matrix.arch }}-test-${{ env.cache-name }}-
${{ runner.os }}-${{ matrix.arch }}-test-
${{ runner.os }}-${{ matrix.arch }}-
${{ runner.os }}-
- uses: julia-actions/julia-buildpkg@latest
- run: |
git config --global user.name Tester
git config --global user.email [email protected]
- uses: julia-actions/julia-runtest@latest
- uses: julia-actions/julia-processcoverage@v1
- uses: codecov/codecov-action@v1
with:
file: lcov.info
docs:
name: Documentation
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: julia-actions/setup-julia@v1
with:
version: '1'
- run: |
git config --global user.name name
git config --global user.email email
git config --global github.user username
- run: |
julia --project=docs -e '
using Pkg
Pkg.add("Documenter")
Pkg.add(url="https://github.com/kose-y/SKFR.jl", rev="master")
Pkg.add(url="https://github.com/OpenMendel/OpenADMIXTURE.jl", rev="main")
Pkg.develop(PackageSpec(path=pwd())) # Was before instantiate()
Pkg.instantiate()'
- run: |
julia --project=docs -e '
using Documenter: doctest
using HaploADMIXTURE
doctest(HaploADMIXTURE)'
- run: julia --project=docs docs/make.jl
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }}