From d229bf12f14460a04c9ed125cba9ce2fd4326e60 Mon Sep 17 00:00:00 2001 From: Jiayuan Ding Date: Tue, 13 Aug 2024 16:25:58 -0700 Subject: [PATCH] Update README.md --- README.md | 17 ++++++----------- 1 file changed, 6 insertions(+), 11 deletions(-) diff --git a/README.md b/README.md index 48b9adb..fd350a3 100644 --- a/README.md +++ b/README.md @@ -4,9 +4,6 @@ ## The official repository for "SpatialCTD: a large-scale TME spatial transcriptomic dataset to evaluate cell type deconvolution for immuno-oncology" -## NEWS -* [05/2023] Human Kidney dataset in SpatialCTD v1 is released! -* [04/2023] Human Lung and Liver datasets in SpatialCTD v1 are released! ## GNNDeconvolver Installation and Running @@ -52,13 +49,11 @@ A few required inputs are as below: If you find our work useful in your research, please consider citing our SpatialCTD paper: ```bibtex -@article{ding2023spatialctd, - title={SpatialCTD: a large-scale TME spatial transcriptomic dataset to evaluate cell type deconvolution for immuno-oncology}, - author={Ding, Jiayuan and Venegas, Julian and Lu, Qiaolin and Wang, Yixin and Wu, Lidan and Jin, Wei and Wen, Hongzhi and Liu, Renming and Tang, Wenzhuo and Li, Zhaoheng and others}, - journal={bioRxiv}, - pages={2023--04}, - year={2023}, - publisher={Cold Spring Harbor Laboratory} -} +@article{ding2024spatialctd, + title={SpatialCTD: A Large-Scale Tumor Microenvironment Spatial Transcriptomic Dataset to Evaluate Cell Type Deconvolution for Immuno-Oncology}, + author={Ding, Jiayuan and Li, Lingxiao and Lu, Qiaolin and Venegas, Julian and Wang, Yixin and Wu, Lidan and Jin, Wei and Wen, Hongzhi and Liu, Renming and Tang, Wenzhuo and others}, + journal={Journal of Computational Biology}, + year={2024}, + publisher={Mary Ann Liebert, Inc., publishers 140 Huguenot Street, 3rd Floor New~…} } ```