debug.yaml

on:
  push:
    branches:
      - main
      - master
  pull_request:
    branches:
      - main
      - master

name: debug R-CMD-check standard

permissions:
  contents: read

jobs:
  R-CMD-check:
    runs-on: '${{ matrix.config.os }}'
    name: '${{ matrix.config.os }} (${{ matrix.config.r }})'
    strategy:
      fail-fast: false
      matrix:
        config:
          - os: ubuntu-latest
            r: release
    env:
      R_KEEP_PKG_SOURCE: true
    steps:
      - uses: actions/checkout@v4
      - name: Allow strace to attach to a process
        if: runner.os == 'Linux'
        shell: bash
        run: |
          echo 0 | sudo tee /proc/sys/kernel/yama/ptrace_scope

      - name: Install Quarto
        uses: quarto-dev/quarto-actions/setup@v2

      - name: (Linux) Install jupyter
        if: runner.os == 'Linux'
        shell: bash
        run: python3 -m pip install jupyter

      - name: (macOS) Install jupyter
        if: runner.os == 'macOS'
        shell: bash
        run: python3 -m pip install --break-system-packages jupyter

      - name: (Windows) Install jupyter
        if: runner.os == 'Windows'
        shell: bash
        run: py -m pip install jupyter

      - uses: r-lib/actions/setup-pandoc@v2
      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: '${{matrix.config.r}}'
          http-user-agent: '${{matrix.config.http-user-agent}}'
          use-public-rspm: true
      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: 'any::rcmdcheck'
          needs: check

      - name: Quarto check
        shell: bash
        run: quarto check

      - name: Quarto render dummy script
        shell: bash
        run: |
          quarto render py_dummy.qmd
          Rscript -e "quarto::quarto_render('py_dummy.qmd')"

      - uses: actions/upload-artifact@v4
        with:
          name: dummy-report
          path: py_dummy.html

      - uses: r-lib/actions/check-r-package@v2
        with:
          upload-snapshots: true