From e765a0c862209f549ad62c3936141d89322b2cad Mon Sep 17 00:00:00 2001
From: Matt Shirley <mdshw5@gmail.com>
Date: Mon, 14 Dec 2020 15:45:17 -0500
Subject: [PATCH] Pass type:None for fastqp

---
 pisces/__init__.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pisces/__init__.py b/pisces/__init__.py
index 680d54c..6d7c300 100755
--- a/pisces/__init__.py
+++ b/pisces/__init__.py
@@ -78,6 +78,7 @@ def read_level_qc(fastq, output_dir, sample_name):
         'nreads': 2000000,
         'base_probs': '0.25,0.25,0.25,0.25,0.1',
         'kmer': 5,
+        'type': None,
         'leftlimit': 1,
         'rightlimit': -1,
         'median-qual': 30,