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ci-test.yml
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name: CI-Test
on:
push:
pull_request:
workflow_dispatch:
release:
types: [published, created]
jobs:
lint:
# pull requests are a duplicate of a branch push if within the same repo.
if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v4
- uses: pre-commit/[email protected]
test:
# pull requests are a duplicate of a branch push if within the same repo.
if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
name: Tests
runs-on: ${{ matrix.host-os }}
needs: lint
strategy:
matrix:
# host-os: ["ubuntu-latest", "macos-13", "macos-14"]
host-os: ["ubuntu-latest"]
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
fail-fast: false
defaults:
run:
shell: bash -l {0}
steps:
- name: Checkout the code
uses: actions/checkout@v4
- name: Set env vars
run: |
export REPOSITORY_NAME=${GITHUB_REPOSITORY#*/} # just the repo, as opposed to org/repo
echo "REPOSITORY_NAME=${REPOSITORY_NAME}" >> $GITHUB_ENV
python_version="${{ matrix.python-version }}"
export PYTHON_VERSION_NODOT="${python_version//\./}"
echo "PYTHON_VERSION_NODOT=${PYTHON_VERSION_NODOT}" >> $GITHUB_ENV
- name: Set MacOS Deployment Target
if: runner.os == 'macOS'
run: |
export MACOSX_DEPLOYMENT_TARGET="10.15"
echo "MACOSX_DEPLOYMENT_TARGET=${MACOSX_DEPLOYMENT_TARGET}" >> $GITHUB_ENV
- name: Install micromamba with build dependencies
uses: mamba-org/setup-micromamba@v1
# if: runner.os == 'macOS'
with:
init-shell: bash
environment-name: build-env
create-args: >-
python=${{ matrix.python-version }}
arpack=*=mpi_openmpi*
gfortran
openmpi=4
# - name: Set up Python ${{ matrix.python-version }}
# # if: matrix.host-os != 'macos-latest'
# if: runner.os != 'macOS'
# uses: actions/setup-python@v5
# with:
# python-version: ${{ matrix.python-version }}
- name: Install MacOS dependencies
if: runner.os == 'macOS'
run: |
set -vxeuo pipefail
brew install tree
# python -m pip install delocate
- name: Install dependencies
run: |
set -vxeuo pipefail
bash ./scripts/install-deps.sh
tree .
ls -Al .
ls -Al ./dist/
# - name: Delocate wheels for MacOS
# if: runner.os == 'macOS'
# run: |
# set -vxeuo pipefail
# delocate-wheelpython -v ./dist/${{ env.REPOSITORY_NAME }}-*-cp${PYTHON_VERSION_NODOT}*.whl
- uses: actions/upload-artifact@v3
with:
name: ${{ env.REPOSITORY_NAME }}-wheels
path: dist/*
- name: Test with pytest
run: |
set -vxeuo pipefail
bash ./scripts/run-tests.sh
- name: Build Docs
run: |
set -vxeuo pipefail
bash ./scripts/build-docs.sh
- uses: actions/upload-artifact@v4
with:
name: ${{ env.REPOSITORY_NAME }}-${{ matrix.python-version }}-${{ matrix.host-os }}-docs
path: docs/build/html/
publish-docs:
if: github.repository_owner == 'NSLS-II' && github.ref == 'refs/heads/master'
runs-on: ${{ matrix.host-os }}
needs: test
strategy:
matrix:
python-version: ["3.10"]
host-os: ["ubuntu-latest"]
fail-fast: false
steps:
- name: Download docs from GitHub artifacts
uses: actions/download-artifact@v3
with:
name: ${{ env.REPOSITORY_NAME }}-${{ matrix.python-version }}-${{ matrix.host-os }}-docs
path: docs/build/html/
- name: Deploy documentation to nsls-ii.github.io
# We pin to the SHA, not the tag, for security reasons.
# https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/security-hardening-for-github-actions#using-third-party-actions
uses: peaceiris/actions-gh-pages@bbdfb200618d235585ad98e965f4aafc39b4c501 # v3.7.3
with:
deploy_key: ${{ secrets.ACTIONS_DOCUMENTATION_DEPLOY_KEY }}
publish_branch: master
publish_dir: ./docs/build/html
external_repository: NSLS-II/NSLS-II.github.io
destination_dir: ${{ env.REPOSITORY_NAME }} # just the repo name, without the "NSLS-II/"
keep_files: true # Keep old files.
force_orphan: false # Keep git history.
publish-to-pypi:
# Hints from:
# - https://github.com/pypa/gh-action-pypi-publish/discussions/28
# - https://github.com/Lightning-AI/lightning/blob/master/.github/workflows/release-pypi.yml
if: github.event_name == 'release'
name: Publish to PyPI
needs: test
runs-on: ubuntu-latest
permissions:
id-token: write
steps:
- name: Set env vars
run: |
export REPOSITORY_NAME=${GITHUB_REPOSITORY#*/} # just the repo, as opposed to org/repo
echo "REPOSITORY_NAME=${REPOSITORY_NAME}" >> $GITHUB_ENV
- uses: actions/checkout@v3
- name: Download wheels from GitHub artifacts
uses: actions/download-artifact@v3
with:
name: ${{ env.REPOSITORY_NAME }}-wheels
path: dist/
- name: Publish wheels to PyPI
uses: pypa/gh-action-pypi-publish@release/v1
with:
packages-dir: ./dist/