diff --git a/coupled_AM2_LM3_SIS2/AM2_SIS2_MOM6i_1deg/MOM_parameter_doc.all b/coupled_AM2_LM3_SIS2/AM2_SIS2_MOM6i_1deg/MOM_parameter_doc.all index ee89f52006..178c3e9b76 100644 --- a/coupled_AM2_LM3_SIS2/AM2_SIS2_MOM6i_1deg/MOM_parameter_doc.all +++ b/coupled_AM2_LM3_SIS2/AM2_SIS2_MOM6i_1deg/MOM_parameter_doc.all @@ -621,10 +621,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/coupled_AM2_LM3_SIS2/Concurrent_ice_1deg/MOM_parameter_doc.all b/coupled_AM2_LM3_SIS2/Concurrent_ice_1deg/MOM_parameter_doc.all index 8eed8ae6d3..ec8a32444d 100644 --- a/coupled_AM2_LM3_SIS2/Concurrent_ice_1deg/MOM_parameter_doc.all +++ b/coupled_AM2_LM3_SIS2/Concurrent_ice_1deg/MOM_parameter_doc.all @@ -621,10 +621,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/coupled_AM2_LM3_SIS2/Intersperse_ice_1deg/MOM_parameter_doc.all b/coupled_AM2_LM3_SIS2/Intersperse_ice_1deg/MOM_parameter_doc.all index 506ea27627..f01c9a0f0a 100644 --- a/coupled_AM2_LM3_SIS2/Intersperse_ice_1deg/MOM_parameter_doc.all +++ b/coupled_AM2_LM3_SIS2/Intersperse_ice_1deg/MOM_parameter_doc.all @@ -621,10 +621,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/Baltic/MOM_parameter_doc.all b/ice_ocean_SIS2/Baltic/MOM_parameter_doc.all index 60a091485f..c81d1610aa 100644 --- a/ice_ocean_SIS2/Baltic/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/Baltic/MOM_parameter_doc.all @@ -621,10 +621,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/Baltic_ALE_z_offline_tracers/MOM_parameter_doc.all b/ice_ocean_SIS2/Baltic_ALE_z_offline_tracers/MOM_parameter_doc.all index 15f750ffdf..070792395e 100644 --- a/ice_ocean_SIS2/Baltic_ALE_z_offline_tracers/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/Baltic_ALE_z_offline_tracers/MOM_parameter_doc.all @@ -658,6 +658,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -669,14 +673,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. diff --git a/ice_ocean_SIS2/Baltic_OM4_025/MOM_parameter_doc.all b/ice_ocean_SIS2/Baltic_OM4_025/MOM_parameter_doc.all index 3d1b4a5e1b..d880025646 100644 --- a/ice_ocean_SIS2/Baltic_OM4_025/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/Baltic_OM4_025/MOM_parameter_doc.all @@ -700,6 +700,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -711,14 +715,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/Baltic_OM4_05/MOM_parameter_doc.all b/ice_ocean_SIS2/Baltic_OM4_05/MOM_parameter_doc.all index a0a2fafa4c..e91c4b5b7a 100644 --- a/ice_ocean_SIS2/Baltic_OM4_05/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/Baltic_OM4_05/MOM_parameter_doc.all @@ -700,6 +700,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -711,14 +715,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/OM4_025/MOM_parameter_doc.all b/ice_ocean_SIS2/OM4_025/MOM_parameter_doc.all index a0e392b145..3e30b5e6a9 100644 --- a/ice_ocean_SIS2/OM4_025/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/OM4_025/MOM_parameter_doc.all @@ -700,6 +700,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -711,14 +715,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/OM4_05/MOM_parameter_doc.all b/ice_ocean_SIS2/OM4_05/MOM_parameter_doc.all index f0ec00458b..698e999cd0 100644 --- a/ice_ocean_SIS2/OM4_05/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/OM4_05/MOM_parameter_doc.all @@ -700,6 +700,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -711,14 +715,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/OM_1deg/MOM_parameter_doc.all b/ice_ocean_SIS2/OM_1deg/MOM_parameter_doc.all index 0a622c330f..f4bf58d745 100644 --- a/ice_ocean_SIS2/OM_1deg/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/OM_1deg/MOM_parameter_doc.all @@ -691,6 +691,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -702,14 +706,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/SIS2/MOM_parameter_doc.all b/ice_ocean_SIS2/SIS2/MOM_parameter_doc.all index 6da72ae035..6fbd863aca 100644 --- a/ice_ocean_SIS2/SIS2/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/SIS2/MOM_parameter_doc.all @@ -502,8 +502,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -585,10 +588,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/SIS2/MOM_parameter_doc.short b/ice_ocean_SIS2/SIS2/MOM_parameter_doc.short index 2eb6776847..8cff871e7a 100644 --- a/ice_ocean_SIS2/SIS2/MOM_parameter_doc.short +++ b/ice_ocean_SIS2/SIS2/MOM_parameter_doc.short @@ -157,8 +157,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.all b/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.all index 96fb1b8e1e..cb33fc5b76 100644 --- a/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.all @@ -502,8 +502,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -585,10 +588,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.short b/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.short index 420fc9e733..345f99f671 100644 --- a/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.short +++ b/ice_ocean_SIS2/SIS2_bergs_cgrid/MOM_parameter_doc.short @@ -157,8 +157,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.all b/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.all index 7af70e9d5d..0ce38d1a85 100644 --- a/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.all +++ b/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.all @@ -502,8 +502,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -585,10 +588,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.short b/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.short index a02861076f..a1f1051980 100644 --- a/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.short +++ b/ice_ocean_SIS2/SIS2_cgrid/MOM_parameter_doc.short @@ -157,8 +157,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/cooling_only/BML/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/cooling_only/BML/MOM_parameter_doc.all index c8a9809fd9..c7ba5ef002 100644 --- a/ocean_only/CVmix_SCM_tests/cooling_only/BML/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/cooling_only/BML/MOM_parameter_doc.all @@ -422,8 +422,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -501,10 +504,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.all index c100f954ca..ffb6b97972 100644 --- a/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.short index f91b61b0e7..7fb2046ddb 100644 --- a/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/cooling_only/EPBL/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.all index 7ab7b269f5..d41f844900 100644 --- a/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.short index 0ba5afb974..2708a92f2b 100644 --- a/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/cooling_only/KPP/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/mech_only/BML/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/mech_only/BML/MOM_parameter_doc.all index 3807fbc635..80cce701a0 100644 --- a/ocean_only/CVmix_SCM_tests/mech_only/BML/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/mech_only/BML/MOM_parameter_doc.all @@ -422,8 +422,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -501,10 +504,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.all index 7f3264d44a..0504f60cef 100644 --- a/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.short index d1e3e50e5e..265fbf7dd2 100644 --- a/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/mech_only/EPBL/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.all index 0cf0a7852c..c4241635ed 100644 --- a/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.short index 33f9ab6a66..bed686813f 100644 --- a/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/mech_only/KPP/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/skin_warming_wind/BML/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/skin_warming_wind/BML/MOM_parameter_doc.all index 103066527c..1d7f551c1c 100644 --- a/ocean_only/CVmix_SCM_tests/skin_warming_wind/BML/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/skin_warming_wind/BML/MOM_parameter_doc.all @@ -422,8 +422,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -501,10 +504,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.all index 436ca0fca8..b9aec9fdb5 100644 --- a/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.short index e861b66e74..ac559b944f 100644 --- a/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/skin_warming_wind/EPBL/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.all index b23b5d0f62..f041075218 100644 --- a/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.short index eca3bac634..46f84353ed 100644 --- a/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/skin_warming_wind/KPP/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/wind_only/BML/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/wind_only/BML/MOM_parameter_doc.all index b64d4a47bb..227520ec33 100644 --- a/ocean_only/CVmix_SCM_tests/wind_only/BML/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/wind_only/BML/MOM_parameter_doc.all @@ -422,8 +422,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -501,10 +504,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.all index a96b47213d..ccbf5f6efb 100644 --- a/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.short index 034f9051b5..1d150411df 100644 --- a/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/wind_only/EPBL/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.all b/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.all index a2b85d03b4..ec59737a2f 100644 --- a/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.all +++ b/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.short b/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.short index 9588e17961..a60aa16ba7 100644 --- a/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.short +++ b/ocean_only/CVmix_SCM_tests/wind_only/KPP/MOM_parameter_doc.short @@ -140,8 +140,11 @@ THICKNESS_CONFIG = "coord" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/DOME/MOM_parameter_doc.all b/ocean_only/DOME/MOM_parameter_doc.all index a2bf35d4c9..5665676a8d 100644 --- a/ocean_only/DOME/MOM_parameter_doc.all +++ b/ocean_only/DOME/MOM_parameter_doc.all @@ -472,8 +472,11 @@ THICKNESS_CONFIG = "DOME" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -513,10 +516,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE_CONFIG = "DOME" ! default = "file" diff --git a/ocean_only/DOME/MOM_parameter_doc.short b/ocean_only/DOME/MOM_parameter_doc.short index 8635da892c..facb5a82c6 100644 --- a/ocean_only/DOME/MOM_parameter_doc.short +++ b/ocean_only/DOME/MOM_parameter_doc.short @@ -164,8 +164,11 @@ THICKNESS_CONFIG = "DOME" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/Phillips_2layer/MOM_parameter_doc.all b/ocean_only/Phillips_2layer/MOM_parameter_doc.all index 1afa79f599..24a4b72c24 100644 --- a/ocean_only/Phillips_2layer/MOM_parameter_doc.all +++ b/ocean_only/Phillips_2layer/MOM_parameter_doc.all @@ -373,8 +373,11 @@ THICKNESS_CONFIG = "phillips" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -422,10 +425,6 @@ VELOCITY_CONFIG = "phillips" ! default = "zero" ! USER - call a user modified routine. VELOCITY_IC_PERTURB_AMP = 0.001 ! [m s-1] default = 0.001 ! The magnitude of the initial velocity perturbation. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = True ! [Boolean] default = False diff --git a/ocean_only/Phillips_2layer/MOM_parameter_doc.short b/ocean_only/Phillips_2layer/MOM_parameter_doc.short index 63844e1f54..c74986d472 100644 --- a/ocean_only/Phillips_2layer/MOM_parameter_doc.short +++ b/ocean_only/Phillips_2layer/MOM_parameter_doc.short @@ -139,8 +139,11 @@ THICKNESS_CONFIG = "phillips" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/SCM_idealized_hurricane/MOM_parameter_doc.all b/ocean_only/SCM_idealized_hurricane/MOM_parameter_doc.all index e22b1f714b..089c22d21a 100644 --- a/ocean_only/SCM_idealized_hurricane/MOM_parameter_doc.all +++ b/ocean_only/SCM_idealized_hurricane/MOM_parameter_doc.all @@ -536,8 +536,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -604,6 +607,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -615,14 +622,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/adjustment2d/layer/MOM_parameter_doc.all b/ocean_only/adjustment2d/layer/MOM_parameter_doc.all index 736647e0c7..f483df9ee5 100644 --- a/ocean_only/adjustment2d/layer/MOM_parameter_doc.all +++ b/ocean_only/adjustment2d/layer/MOM_parameter_doc.all @@ -428,8 +428,11 @@ THICKNESS_CONFIG = "adjustment2d" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -513,10 +516,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/adjustment2d/layer/MOM_parameter_doc.short b/ocean_only/adjustment2d/layer/MOM_parameter_doc.short index dfd21b3bc7..5c6dc849a9 100644 --- a/ocean_only/adjustment2d/layer/MOM_parameter_doc.short +++ b/ocean_only/adjustment2d/layer/MOM_parameter_doc.short @@ -154,8 +154,11 @@ THICKNESS_CONFIG = "adjustment2d" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/adjustment2d/rho/MOM_parameter_doc.all b/ocean_only/adjustment2d/rho/MOM_parameter_doc.all index aab52a6e4f..22b9aa2af2 100644 --- a/ocean_only/adjustment2d/rho/MOM_parameter_doc.all +++ b/ocean_only/adjustment2d/rho/MOM_parameter_doc.all @@ -586,8 +586,11 @@ THICKNESS_CONFIG = "adjustment2d" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -658,6 +661,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -669,14 +676,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/adjustment2d/rho/MOM_parameter_doc.short b/ocean_only/adjustment2d/rho/MOM_parameter_doc.short index 0813fb8cdd..886b883030 100644 --- a/ocean_only/adjustment2d/rho/MOM_parameter_doc.short +++ b/ocean_only/adjustment2d/rho/MOM_parameter_doc.short @@ -204,8 +204,11 @@ THICKNESS_CONFIG = "adjustment2d" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/adjustment2d/z/MOM_parameter_doc.all b/ocean_only/adjustment2d/z/MOM_parameter_doc.all index 62bc745ba3..a36d97be70 100644 --- a/ocean_only/adjustment2d/z/MOM_parameter_doc.all +++ b/ocean_only/adjustment2d/z/MOM_parameter_doc.all @@ -543,8 +543,11 @@ THICKNESS_CONFIG = "adjustment2d" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -615,6 +618,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -626,14 +633,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/adjustment2d/z/MOM_parameter_doc.short b/ocean_only/adjustment2d/z/MOM_parameter_doc.short index 76dcb17349..5eb38dab1f 100644 --- a/ocean_only/adjustment2d/z/MOM_parameter_doc.short +++ b/ocean_only/adjustment2d/z/MOM_parameter_doc.short @@ -182,8 +182,11 @@ THICKNESS_CONFIG = "adjustment2d" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/benchmark/MOM_parameter_doc.all b/ocean_only/benchmark/MOM_parameter_doc.all index 27e1f63dd4..872eac3fff 100644 --- a/ocean_only/benchmark/MOM_parameter_doc.all +++ b/ocean_only/benchmark/MOM_parameter_doc.all @@ -472,8 +472,11 @@ THICKNESS_CONFIG = "benchmark" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -542,10 +545,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/benchmark/MOM_parameter_doc.short b/ocean_only/benchmark/MOM_parameter_doc.short index f67f8a46ff..f754acf524 100644 --- a/ocean_only/benchmark/MOM_parameter_doc.short +++ b/ocean_only/benchmark/MOM_parameter_doc.short @@ -148,8 +148,11 @@ THICKNESS_CONFIG = "benchmark" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/circle_obcs/MOM_parameter_doc.all b/ocean_only/circle_obcs/MOM_parameter_doc.all index 527484a23d..0bb2a9d56d 100644 --- a/ocean_only/circle_obcs/MOM_parameter_doc.all +++ b/ocean_only/circle_obcs/MOM_parameter_doc.all @@ -478,8 +478,11 @@ THICKNESS_CONFIG = "circle_obcs" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -528,10 +531,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. OBC_SEGMENT_001_DATA = "U=value:0.0,V=value:0.0,SSH=value:0.0" ! diff --git a/ocean_only/circle_obcs/MOM_parameter_doc.short b/ocean_only/circle_obcs/MOM_parameter_doc.short index 834b13b9c9..706c3ca98e 100644 --- a/ocean_only/circle_obcs/MOM_parameter_doc.short +++ b/ocean_only/circle_obcs/MOM_parameter_doc.short @@ -155,8 +155,11 @@ THICKNESS_CONFIG = "circle_obcs" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/double_gyre/MOM_parameter_doc.all b/ocean_only/double_gyre/MOM_parameter_doc.all index 129b277d89..4eede24ad3 100644 --- a/ocean_only/double_gyre/MOM_parameter_doc.all +++ b/ocean_only/double_gyre/MOM_parameter_doc.all @@ -363,8 +363,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -404,10 +407,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/external_gwave/MOM_parameter_doc.all b/ocean_only/external_gwave/MOM_parameter_doc.all index c8f5019ede..f8949fbf0c 100644 --- a/ocean_only/external_gwave/MOM_parameter_doc.all +++ b/ocean_only/external_gwave/MOM_parameter_doc.all @@ -428,8 +428,11 @@ THICKNESS_CONFIG = "external_gwave" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -502,10 +505,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/external_gwave/MOM_parameter_doc.short b/ocean_only/external_gwave/MOM_parameter_doc.short index 6621ae41a2..349981cc9f 100644 --- a/ocean_only/external_gwave/MOM_parameter_doc.short +++ b/ocean_only/external_gwave/MOM_parameter_doc.short @@ -151,8 +151,11 @@ THICKNESS_CONFIG = "external_gwave" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/flow_downslope/layer/MOM_parameter_doc.all b/ocean_only/flow_downslope/layer/MOM_parameter_doc.all index 173dac8b6a..bfa7d550de 100644 --- a/ocean_only/flow_downslope/layer/MOM_parameter_doc.all +++ b/ocean_only/flow_downslope/layer/MOM_parameter_doc.all @@ -439,8 +439,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -512,10 +515,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/flow_downslope/layer/MOM_parameter_doc.short b/ocean_only/flow_downslope/layer/MOM_parameter_doc.short index 6b00defbc0..318aa8a1d9 100644 --- a/ocean_only/flow_downslope/layer/MOM_parameter_doc.short +++ b/ocean_only/flow_downslope/layer/MOM_parameter_doc.short @@ -151,8 +151,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/flow_downslope/rho/MOM_parameter_doc.all b/ocean_only/flow_downslope/rho/MOM_parameter_doc.all index 64031f8ad5..0d5510df2a 100644 --- a/ocean_only/flow_downslope/rho/MOM_parameter_doc.all +++ b/ocean_only/flow_downslope/rho/MOM_parameter_doc.all @@ -597,8 +597,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -659,6 +662,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -670,14 +677,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/flow_downslope/rho/MOM_parameter_doc.short b/ocean_only/flow_downslope/rho/MOM_parameter_doc.short index ae282c02ec..7947618fe9 100644 --- a/ocean_only/flow_downslope/rho/MOM_parameter_doc.short +++ b/ocean_only/flow_downslope/rho/MOM_parameter_doc.short @@ -201,8 +201,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/flow_downslope/sigma/MOM_parameter_doc.all b/ocean_only/flow_downslope/sigma/MOM_parameter_doc.all index 045ce929cb..2d38fcbadc 100644 --- a/ocean_only/flow_downslope/sigma/MOM_parameter_doc.all +++ b/ocean_only/flow_downslope/sigma/MOM_parameter_doc.all @@ -554,8 +554,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -616,6 +619,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -627,14 +634,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/flow_downslope/sigma/MOM_parameter_doc.short b/ocean_only/flow_downslope/sigma/MOM_parameter_doc.short index 03a3f02e36..a9208e563a 100644 --- a/ocean_only/flow_downslope/sigma/MOM_parameter_doc.short +++ b/ocean_only/flow_downslope/sigma/MOM_parameter_doc.short @@ -177,8 +177,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/flow_downslope/z/MOM_parameter_doc.all b/ocean_only/flow_downslope/z/MOM_parameter_doc.all index 1547bafe26..a6b4e4ff73 100644 --- a/ocean_only/flow_downslope/z/MOM_parameter_doc.all +++ b/ocean_only/flow_downslope/z/MOM_parameter_doc.all @@ -554,8 +554,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -616,6 +619,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -627,14 +634,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/flow_downslope/z/MOM_parameter_doc.short b/ocean_only/flow_downslope/z/MOM_parameter_doc.short index e8df6d841c..bf3dd7021f 100644 --- a/ocean_only/flow_downslope/z/MOM_parameter_doc.short +++ b/ocean_only/flow_downslope/z/MOM_parameter_doc.short @@ -177,8 +177,11 @@ THICKNESS_CONFIG = "DOME2D" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/global_ALE/hycom/MOM_parameter_doc.all b/ocean_only/global_ALE/hycom/MOM_parameter_doc.all index 4f610b536c..ee9ce2a864 100644 --- a/ocean_only/global_ALE/hycom/MOM_parameter_doc.all +++ b/ocean_only/global_ALE/hycom/MOM_parameter_doc.all @@ -690,6 +690,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -701,14 +705,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/global_ALE/layer/MOM_parameter_doc.all b/ocean_only/global_ALE/layer/MOM_parameter_doc.all index 418896ab7c..4e8dc3de21 100644 --- a/ocean_only/global_ALE/layer/MOM_parameter_doc.all +++ b/ocean_only/global_ALE/layer/MOM_parameter_doc.all @@ -582,10 +582,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/global_ALE/z/MOM_parameter_doc.all b/ocean_only/global_ALE/z/MOM_parameter_doc.all index 3b70365ebd..1cf774595f 100644 --- a/ocean_only/global_ALE/z/MOM_parameter_doc.all +++ b/ocean_only/global_ALE/z/MOM_parameter_doc.all @@ -642,6 +642,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -653,14 +657,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/lock_exchange/MOM_parameter_doc.all b/ocean_only/lock_exchange/MOM_parameter_doc.all index e9fbf701f5..eddd32c4e7 100644 --- a/ocean_only/lock_exchange/MOM_parameter_doc.all +++ b/ocean_only/lock_exchange/MOM_parameter_doc.all @@ -428,8 +428,11 @@ THICKNESS_CONFIG = "lock_exchange" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -505,10 +508,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/lock_exchange/MOM_parameter_doc.short b/ocean_only/lock_exchange/MOM_parameter_doc.short index 2229f7bafc..f9ab099a9a 100644 --- a/ocean_only/lock_exchange/MOM_parameter_doc.short +++ b/ocean_only/lock_exchange/MOM_parameter_doc.short @@ -146,8 +146,11 @@ THICKNESS_CONFIG = "lock_exchange" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.all b/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.all index b81bdff6ab..dd60eb6d1a 100644 --- a/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.all +++ b/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.all @@ -543,8 +543,11 @@ THICKNESS_CONFIG = "rossby_front" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -601,6 +604,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "rossby_front" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -612,14 +619,6 @@ VELOCITY_CONFIG = "rossby_front" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.short b/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.short index c66f718a8b..f653a124e7 100644 --- a/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.short +++ b/ocean_only/mixed_layer_restrat_2d/MOM_parameter_doc.short @@ -159,8 +159,11 @@ THICKNESS_CONFIG = "rossby_front" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/nonBous_global/MOM_parameter_doc.all b/ocean_only/nonBous_global/MOM_parameter_doc.all index 8689444339..0e11a7f5f1 100644 --- a/ocean_only/nonBous_global/MOM_parameter_doc.all +++ b/ocean_only/nonBous_global/MOM_parameter_doc.all @@ -452,8 +452,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -535,10 +538,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = True ! [Boolean] default = True - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/nonBous_global/MOM_parameter_doc.short b/ocean_only/nonBous_global/MOM_parameter_doc.short index 4b7ec734a5..1df56f0fca 100644 --- a/ocean_only/nonBous_global/MOM_parameter_doc.short +++ b/ocean_only/nonBous_global/MOM_parameter_doc.short @@ -152,8 +152,11 @@ THICKNESS_CONFIG = "file" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/resting/layer/MOM_parameter_doc.all b/ocean_only/resting/layer/MOM_parameter_doc.all index 76454dbbaa..cf4bf7fa4b 100644 --- a/ocean_only/resting/layer/MOM_parameter_doc.all +++ b/ocean_only/resting/layer/MOM_parameter_doc.all @@ -428,8 +428,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -497,10 +500,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/resting/z/MOM_parameter_doc.all b/ocean_only/resting/z/MOM_parameter_doc.all index 7b7b1859a0..a928f865fd 100644 --- a/ocean_only/resting/z/MOM_parameter_doc.all +++ b/ocean_only/resting/z/MOM_parameter_doc.all @@ -543,8 +543,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -601,6 +604,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -612,14 +619,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/seamount/layer/MOM_parameter_doc.all b/ocean_only/seamount/layer/MOM_parameter_doc.all index 07e8b55929..cd8adf8e81 100644 --- a/ocean_only/seamount/layer/MOM_parameter_doc.all +++ b/ocean_only/seamount/layer/MOM_parameter_doc.all @@ -453,8 +453,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -530,10 +533,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/seamount/layer/MOM_parameter_doc.short b/ocean_only/seamount/layer/MOM_parameter_doc.short index 9b6d5ff4f3..d60745a154 100644 --- a/ocean_only/seamount/layer/MOM_parameter_doc.short +++ b/ocean_only/seamount/layer/MOM_parameter_doc.short @@ -154,8 +154,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/seamount/rho/MOM_parameter_doc.all b/ocean_only/seamount/rho/MOM_parameter_doc.all index 17cc826f33..39ff92728d 100644 --- a/ocean_only/seamount/rho/MOM_parameter_doc.all +++ b/ocean_only/seamount/rho/MOM_parameter_doc.all @@ -611,8 +611,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -675,6 +678,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -686,14 +693,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/seamount/rho/MOM_parameter_doc.short b/ocean_only/seamount/rho/MOM_parameter_doc.short index dd85a0a954..0e6fc13bff 100644 --- a/ocean_only/seamount/rho/MOM_parameter_doc.short +++ b/ocean_only/seamount/rho/MOM_parameter_doc.short @@ -204,8 +204,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/seamount/sigma/MOM_parameter_doc.all b/ocean_only/seamount/sigma/MOM_parameter_doc.all index fa8a9fcae1..de4bc2b285 100644 --- a/ocean_only/seamount/sigma/MOM_parameter_doc.all +++ b/ocean_only/seamount/sigma/MOM_parameter_doc.all @@ -568,8 +568,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -629,6 +632,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -640,14 +647,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/seamount/sigma/MOM_parameter_doc.short b/ocean_only/seamount/sigma/MOM_parameter_doc.short index 13fc6d5fa9..f589febd83 100644 --- a/ocean_only/seamount/sigma/MOM_parameter_doc.short +++ b/ocean_only/seamount/sigma/MOM_parameter_doc.short @@ -182,8 +182,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/seamount/z/MOM_parameter_doc.all b/ocean_only/seamount/z/MOM_parameter_doc.all index be753df301..74f12ef18e 100644 --- a/ocean_only/seamount/z/MOM_parameter_doc.all +++ b/ocean_only/seamount/z/MOM_parameter_doc.all @@ -568,8 +568,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -629,6 +632,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -640,14 +647,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/seamount/z/MOM_parameter_doc.short b/ocean_only/seamount/z/MOM_parameter_doc.short index f08da6228e..b26fb876a1 100644 --- a/ocean_only/seamount/z/MOM_parameter_doc.short +++ b/ocean_only/seamount/z/MOM_parameter_doc.short @@ -182,8 +182,11 @@ THICKNESS_CONFIG = "seamount" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/single_column/BML/MOM_parameter_doc.all b/ocean_only/single_column/BML/MOM_parameter_doc.all index f0753fad70..940cadf6b3 100644 --- a/ocean_only/single_column/BML/MOM_parameter_doc.all +++ b/ocean_only/single_column/BML/MOM_parameter_doc.all @@ -534,10 +534,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/single_column/EPBL/MOM_parameter_doc.all b/ocean_only/single_column/EPBL/MOM_parameter_doc.all index e870edfbab..f87ec7d28b 100644 --- a/ocean_only/single_column/EPBL/MOM_parameter_doc.all +++ b/ocean_only/single_column/EPBL/MOM_parameter_doc.all @@ -590,6 +590,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -601,14 +605,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/single_column/KPP/MOM_parameter_doc.all b/ocean_only/single_column/KPP/MOM_parameter_doc.all index 231cf72b1a..308e8474d8 100644 --- a/ocean_only/single_column/KPP/MOM_parameter_doc.all +++ b/ocean_only/single_column/KPP/MOM_parameter_doc.all @@ -590,6 +590,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -601,14 +605,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/sloshing/layer/MOM_parameter_doc.all b/ocean_only/sloshing/layer/MOM_parameter_doc.all index 2214a476e9..3401685c7b 100644 --- a/ocean_only/sloshing/layer/MOM_parameter_doc.all +++ b/ocean_only/sloshing/layer/MOM_parameter_doc.all @@ -431,8 +431,11 @@ THICKNESS_CONFIG = "sloshing" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -511,10 +514,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/sloshing/layer/MOM_parameter_doc.short b/ocean_only/sloshing/layer/MOM_parameter_doc.short index c15c225480..11e1aa5e82 100644 --- a/ocean_only/sloshing/layer/MOM_parameter_doc.short +++ b/ocean_only/sloshing/layer/MOM_parameter_doc.short @@ -148,8 +148,11 @@ THICKNESS_CONFIG = "sloshing" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/sloshing/rho/MOM_parameter_doc.all b/ocean_only/sloshing/rho/MOM_parameter_doc.all index cb27ef2768..7df198edfa 100644 --- a/ocean_only/sloshing/rho/MOM_parameter_doc.all +++ b/ocean_only/sloshing/rho/MOM_parameter_doc.all @@ -589,8 +589,11 @@ THICKNESS_CONFIG = "sloshing" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -658,6 +661,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -669,14 +676,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/sloshing/rho/MOM_parameter_doc.short b/ocean_only/sloshing/rho/MOM_parameter_doc.short index 66a74be420..89a30fa6f8 100644 --- a/ocean_only/sloshing/rho/MOM_parameter_doc.short +++ b/ocean_only/sloshing/rho/MOM_parameter_doc.short @@ -196,8 +196,11 @@ THICKNESS_CONFIG = "sloshing" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/sloshing/z/MOM_parameter_doc.all b/ocean_only/sloshing/z/MOM_parameter_doc.all index 0b4b3b8784..17fd1fe87f 100644 --- a/ocean_only/sloshing/z/MOM_parameter_doc.all +++ b/ocean_only/sloshing/z/MOM_parameter_doc.all @@ -546,8 +546,11 @@ THICKNESS_CONFIG = "sloshing" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -615,6 +618,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -626,14 +633,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/sloshing/z/MOM_parameter_doc.short b/ocean_only/sloshing/z/MOM_parameter_doc.short index 7741ea7c6b..b221986ab2 100644 --- a/ocean_only/sloshing/z/MOM_parameter_doc.short +++ b/ocean_only/sloshing/z/MOM_parameter_doc.short @@ -174,8 +174,11 @@ THICKNESS_CONFIG = "sloshing" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. diff --git a/ocean_only/torus_advection_test/MOM_parameter_doc.all b/ocean_only/torus_advection_test/MOM_parameter_doc.all index 499bbdd728..ba7178c410 100644 --- a/ocean_only/torus_advection_test/MOM_parameter_doc.all +++ b/ocean_only/torus_advection_test/MOM_parameter_doc.all @@ -450,8 +450,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -518,10 +521,6 @@ INITIAL_U_CONST = 0.2 ! [m s-1] default = 0.0 ! A initial uniform value for the zonal flow. INITIAL_V_CONST = 0.2 ! [m s-1] default = 0.0 ! A initial uniform value for the meridional flow. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. diff --git a/ocean_only/tracer_mixing/rho/MOM_parameter_doc.all b/ocean_only/tracer_mixing/rho/MOM_parameter_doc.all index fc9258fe3f..b836585721 100644 --- a/ocean_only/tracer_mixing/rho/MOM_parameter_doc.all +++ b/ocean_only/tracer_mixing/rho/MOM_parameter_doc.all @@ -586,8 +586,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -659,6 +662,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -670,14 +677,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/tracer_mixing/z/MOM_parameter_doc.all b/ocean_only/tracer_mixing/z/MOM_parameter_doc.all index bb73b4189b..ea9ab16304 100644 --- a/ocean_only/tracer_mixing/z/MOM_parameter_doc.all +++ b/ocean_only/tracer_mixing/z/MOM_parameter_doc.all @@ -543,8 +543,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -616,6 +619,10 @@ TRIM_IC_FOR_P_SURF = False ! [Boolean] default = False ! If true, cuts way the top of the column for initial conditions at the depth ! where the hydrostatic pressure matches the imposed surface pressure which is ! read from file. +REGRID_ACCELERATE_INIT = False ! [Boolean] default = False + ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding + ! algorithm to push the initial grid to be consistent with the initial + ! condition. Useful only for state-based and iterative coordinates. VELOCITY_CONFIG = "zero" ! default = "zero" ! A string that determines how the initial velocities are specified for a new ! run: @@ -627,14 +634,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. -REGRID_ACCELERATE_INIT = False ! [Boolean] default = False - ! If true, runs REGRID_ACCELERATE_ITERATIONS iterations of the regridding - ! algorithm to push the initial grid to be consistent with the initial - ! condition. Useful only for state-based and iterative coordinates. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False diff --git a/ocean_only/unit_tests/MOM_parameter_doc.all b/ocean_only/unit_tests/MOM_parameter_doc.all index 1f4b91bfe1..7a21d0a865 100644 --- a/ocean_only/unit_tests/MOM_parameter_doc.all +++ b/ocean_only/unit_tests/MOM_parameter_doc.all @@ -361,8 +361,11 @@ THICKNESS_CONFIG = "uniform" ! default = "uniform" ! A string that determines how the initial layer thicknesses are specified for a ! new run: ! file - read interface heights from the file specified + ! by (THICKNESS_FILE). ! thickness_file - read thicknesses from the file specified ! by (THICKNESS_FILE). + ! mass_file - read thicknesses in units of mass per unit area from the file + ! specified by (THICKNESS_FILE). ! coord - determined by ALE coordinate. ! uniform - uniform thickness layers evenly distributed ! between the surface and MAXIMUM_DEPTH. @@ -402,10 +405,6 @@ VELOCITY_CONFIG = "zero" ! default = "zero" ! rossby_front - a mixed layer front in thermal wind balance. ! soliton - Equatorial Rossby soliton. ! USER - call a user modified routine. -CONVERT_THICKNESS_UNITS = False ! [Boolean] default = False - ! If true, convert the thickness initial conditions from units of m to kg m-2 - ! or vice versa, depending on whether BOUSSINESQ is defined. This does not apply - ! if a restart file is read. ODA_INCUPD = False ! [Boolean] default = False ! If true, oda incremental updates will be applied everywhere in the domain. SPONGE = False ! [Boolean] default = False