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Is there a pretrained model supporting extraction of symptoms and diseases? #174

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paulxshen opened this issue Jan 29, 2020 · 5 comments
Open

Is there a pretrained model supporting extraction of symptoms and diseases? #174

paulxshen opened this issue Jan 29, 2020 · 5 comments
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enhancement New feature or request

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@paulxshen
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Is there a pretrained model supporting extraction of symptoms and diseases?
Thanks!
@paulxshen paulxshen added the enhancement New feature or request label Jan 29, 2020
@swfarnsworth
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Sorry for my delayed reply. I've been working with my colleagues to see if we have the data available to create this for you. I hope to be back with definitive information soon.

@paulxshen
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Thank you I appreciate it.

@SULAMBERT
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I would love to get this service. even if data is not available, can you show us with sample data how to train the pretrained model with disease and symptoms data?

@swfarnsworth
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@SULAMBERT I found a dataset online that could potentially be converted to BRAT format and used to train a model with medaCy. https://www.ncbi.nlm.nih.gov/CBBresearch/Dogan/DISEASE/

@rbhambriiit
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Sounds like a nice feature. Let me know if I can contribute in some way. I haven't used medaCy a lot but happy to collaborate and learn.

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@paulxshen @rbhambriiit @SULAMBERT @swfarnsworth