From a550ae5b58a3dba619fc844ddb1fed62b69fcaf8 Mon Sep 17 00:00:00 2001 From: Jeremy Sauer Date: Tue, 16 Apr 2024 16:59:06 -0600 Subject: [PATCH 1/4] Modified the MBL.rst tutorial case documentation to reflect the move of the archived dataset for the MBL case to the zenodo repository. --- docs/Tutorial/cases/MBL.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/Tutorial/cases/MBL.rst b/docs/Tutorial/cases/MBL.rst index ca1d7bc..e690ee4 100644 --- a/docs/Tutorial/cases/MBL.rst +++ b/docs/Tutorial/cases/MBL.rst @@ -31,7 +31,7 @@ Input parameters Execute FastEddy ---------------- -Run FastEddy using the input parameters file /examples/Example04_BOMEX.in. Note that the BOMEX case requires an initial condition provided in /datasets/BOMEX_IC/FE_BOMEX.0. To execute FastEddy, follow the instructions here: https://github.com/NCAR/FastEddy-model/blob/main/README.md. +Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Note that this example moist dynamics validation case requires an additional dataset available as a gzip compressed tape archive file at https://doi.org/10.5281/zenodo.10982246. The contents of the archive incude an initial conditions file BOMEX_IC/FE_BOMEX.0 which is needed to run FastEddy for this case. The archive dataset also contains results from the 11 models that participated in the original Siebesma et al. 2003 model intercomparison as NetCDF files under BOMEX_Siebesma2003_models/*.nc. Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Be sure to modify the input parameters file by setting the path to your downloaded and extracted initial conditions file from the archived dataset. Visualize the output -------------------- From ac922d442cab44b923fc0e57236da1af4f2671ea Mon Sep 17 00:00:00 2001 From: Jeremy Sauer Date: Tue, 16 Apr 2024 17:29:44 -0600 Subject: [PATCH 2/4] Final minor adjustments to the moist tutorial RTD instructions. --- docs/Tutorial/cases/MBL.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/Tutorial/cases/MBL.rst b/docs/Tutorial/cases/MBL.rst index e690ee4..2150a5a 100644 --- a/docs/Tutorial/cases/MBL.rst +++ b/docs/Tutorial/cases/MBL.rst @@ -31,7 +31,7 @@ Input parameters Execute FastEddy ---------------- -Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Note that this example moist dynamics validation case requires an additional dataset available as a gzip compressed tape archive file at https://doi.org/10.5281/zenodo.10982246. The contents of the archive incude an initial conditions file BOMEX_IC/FE_BOMEX.0 which is needed to run FastEddy for this case. The archive dataset also contains results from the 11 models that participated in the original Siebesma et al. 2003 model intercomparison as NetCDF files under BOMEX_Siebesma2003_models/*.nc. Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Be sure to modify the input parameters file by setting the path to your downloaded and extracted initial conditions file from the archived dataset. +Note that this example moist dynamics validation case example requires an additional dataset available as a gzip compressed tape archive file at https://doi.org/10.5281/zenodo.10982246. The contents of the archive incude an initial conditions file BOMEX_IC/FE_BOMEX.0 which is needed to run FastEddy for this case. The archive dataset also contains results from the 11 models that participated in the original Siebesma et al. 2003 model intercomparison as NetCDF files under BOMEX_Siebesma2003_models/*.nc. Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Be sure to copy the extracted initial conditions file from the archived dataset into the initial subdirectory of your case run directory. Visualize the output -------------------- From 55f9b6343b9beb1aa5f105efd7e66704a40559fd Mon Sep 17 00:00:00 2001 From: Jeremy Sauer Date: Tue, 16 Apr 2024 17:54:44 -0600 Subject: [PATCH 3/4] Modified the notebook to expressly point out the need to provide the PATH to archive dataset files of Siebesma 2003 model results --- tutorials/notebooks/FE_Postrocessing_Example04_BOMEX.ipynb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tutorials/notebooks/FE_Postrocessing_Example04_BOMEX.ipynb b/tutorials/notebooks/FE_Postrocessing_Example04_BOMEX.ipynb index aaea2d4..667b792 100644 --- a/tutorials/notebooks/FE_Postrocessing_Example04_BOMEX.ipynb +++ b/tutorials/notebooks/FE_Postrocessing_Example04_BOMEX.ipynb @@ -80,7 +80,7 @@ "path_root = 'INSERT_PATH_TO_YOUR_RUN_DIRECTORY'\n", "path_out_1 = path_root + 'output/'\n", "path_ini = path_root + 'initial/'\n", - "path_sieb = '../datasets/BOMEX_Siebesma2003_models/' \n", + "path_sieb = 'INSERT_PATH_TO_YOUR_BOMEX_Siebesma2003_models_DIRECTORY' \n", "save_plot_opt = 1\n", "folder_figs_name = 'Figures_BOMEX'\n", "###\n", From bfced39b0e29987bf4184f6145d74d2c20769867 Mon Sep 17 00:00:00 2001 From: Jeremy Sauer Date: Tue, 16 Apr 2024 18:14:10 -0600 Subject: [PATCH 4/4] Added an escape character to precede the use of an asterix in the MBL.rst file which caused warnings during the Build_docs of the GitHub actions check. --- docs/Tutorial/cases/MBL.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/Tutorial/cases/MBL.rst b/docs/Tutorial/cases/MBL.rst index 2150a5a..3d06bbc 100644 --- a/docs/Tutorial/cases/MBL.rst +++ b/docs/Tutorial/cases/MBL.rst @@ -31,7 +31,7 @@ Input parameters Execute FastEddy ---------------- -Note that this example moist dynamics validation case example requires an additional dataset available as a gzip compressed tape archive file at https://doi.org/10.5281/zenodo.10982246. The contents of the archive incude an initial conditions file BOMEX_IC/FE_BOMEX.0 which is needed to run FastEddy for this case. The archive dataset also contains results from the 11 models that participated in the original Siebesma et al. 2003 model intercomparison as NetCDF files under BOMEX_Siebesma2003_models/*.nc. Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Be sure to copy the extracted initial conditions file from the archived dataset into the initial subdirectory of your case run directory. +Note that this example moist dynamics validation case example requires an additional dataset available as a gzip compressed tape archive file at https://doi.org/10.5281/zenodo.10982246. The contents of the archive incude an initial conditions file BOMEX_IC/FE_BOMEX.0 which is needed to run FastEddy for this case. The archive dataset also contains results from the 11 models that participated in the original Siebesma et al. 2003 model intercomparison as NetCDF files under BOMEX_Siebesma2003_models/\*.nc. Run FastEddy using the input parameters file /tutorials/examples/Example04_BOMEX.in. Be sure to copy the extracted initial conditions file from the archived dataset into the initial subdirectory of your case run directory. Visualize the output --------------------