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Compile - include SNP names? #53

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conJUSTover opened this issue Jul 14, 2020 · 1 comment
Open

Compile - include SNP names? #53

conJUSTover opened this issue Jul 14, 2020 · 1 comment

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@conJUSTover
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Not directly and issue, but would it be possible to have the compile function order the results based on the given SNP name instead of the gene ID and aaPOS? I have a rather large dataset, and there are some codons that have missense SNPs in two positions. But, none of the outputs have both of them listed, since they are given the same sequence conservation score. Thanks!

@TomJKono
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Hello,

Sorry for the email/comment blast! I'll look to see if there is a transcript in the barley data set that has multiple substitutions in the same codon and update the code to handle that case. Thank you for your patience!

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