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@MetaSUB

MetaSUB

A global consortium dedicated to understanding the urban microbiome

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  1. MetaSUB_CAP MetaSUB_CAP Public

    A comprehensive pipeline for short read metagenomic data

    Python 24 11

  2. CAP2 CAP2 Public

    Python 13 6

  3. metasub_utils metasub_utils Public

    Python 8 1

  4. MetaSUB-metadata MetaSUB-metadata Public

    Python 5 4

  5. bioinformatics_management bioinformatics_management Public

    3

  6. main_paper_figures main_paper_figures Public

    Code used to generate figures for the MetaSUB Main Paper Released August 2019

    Jupyter Notebook 3 2

Repositories

Showing 10 of 11 repositories
  • Urban-RNA-Virome Public Forked from Junwu302/Urban_RNA_Virome
    MetaSUB/Urban-RNA-Virome’s past year of commit activity
    R 0 1 0 0 Updated Sep 24, 2024
  • CAP2 Public
    MetaSUB/CAP2’s past year of commit activity
    Python 13 MIT 6 8 4 Updated Oct 3, 2023
  • metasub_utils Public
    MetaSUB/metasub_utils’s past year of commit activity
    Python 8 MIT 1 2 1 Updated Dec 26, 2022
  • main_paper_figures Public

    Code used to generate figures for the MetaSUB Main Paper Released August 2019

    MetaSUB/main_paper_figures’s past year of commit activity
    Jupyter Notebook 3 2 2 0 Updated Oct 5, 2021
  • MetaSUB_CAP Public

    A comprehensive pipeline for short read metagenomic data

    MetaSUB/MetaSUB_CAP’s past year of commit activity
    Python 24 MIT 11 7 1 Updated Aug 25, 2020
  • MetaSUB-metadata Public
    MetaSUB/MetaSUB-metadata’s past year of commit activity
    Python 5 4 0 1 Updated Feb 22, 2020
  • bioinformatics_management Public
    MetaSUB/bioinformatics_management’s past year of commit activity
    3 0 1 0 Updated Aug 26, 2019
  • MetaSUB_assembly_CAP Public
    MetaSUB/MetaSUB_assembly_CAP’s past year of commit activity
    Python 1 MIT 0 1 0 Updated May 27, 2019
  • MetaSUB_QC_Pipeline Public
    MetaSUB/MetaSUB_QC_Pipeline’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Jan 17, 2019
  • metasub-scripts Public
    MetaSUB/metasub-scripts’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 10, 2018
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