From 2b18784b3c53c12545000663fb4660526b978d0b Mon Sep 17 00:00:00 2001 From: Simone Maestri Date: Thu, 9 Dec 2021 15:09:55 +0100 Subject: [PATCH] Update install.sh --- install.sh | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/install.sh b/install.sh index a06bd5d..eed9489 100644 --- a/install.sh +++ b/install.sh @@ -21,9 +21,9 @@ PIPELINE_DIR=$(realpath $( dirname "${BASH_SOURCE[0]}" )) MINICONDA_DIR=$(which conda | sed 's/bin.*$//') conda config --add channels bioconda -conda config --add channels conda-forge -conda config --add channels r conda config --add channels anaconda +conda config --add channels r +conda config --add channels conda-forge conda create -n ONTrack_env python blast emboss vsearch seqtk mafft minimap2 samtools nanopolish r bioconductor-biostrings bedtools ncurses source activate ONTrack_env pip install pycoQC