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datautils.py
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datautils.py
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from functools import partial
from io import DEFAULT_BUFFER_SIZE
import pandas as pd
from pytorch_lightning.utilities.cloud_io import load
from sklearn.preprocessing import StandardScaler
import torch
import argparse
import pytorch_lightning as pl
from pl_bolts.datamodules import CIFAR10DataModule
from torchvision.datasets import STL10, CIFAR100
from typing import Any, Callable, Optional, Union, List
from torch.utils.data import DataLoader, random_split
import numpy as np
import os
import random
from torch.utils.data import DataLoader, Dataset, random_split, Subset
import glob
from itertools import combinations
from torchvision.datasets import CIFAR10
from kornia.color.lab import RgbToLab
from torchvision import transforms
from pl_bolts.transforms.dataset_normalizations import cifar10_normalization
import utils
CIFAR_CLASSES = ['airplane', 'automobile', 'bird', 'cat', 'deer', 'dog', 'frog', 'horse', 'ship', 'truck']
REAL_TASKS = list(combinations(CIFAR_CLASSES, 5))[:126]
class Rgb2L(RgbToLab):
def forward(self, image: torch.Tensor) -> torch.Tensor:
x = super().forward(image)
return x[:1]
class MyCIFAR10(CIFAR10):
FACTORS_DF_PATH='./data/cifar-factors.csv'
def __init__(
self,
root: str,
train: bool = True,
transform: Optional[Callable] = None,
target_transform: Optional[Callable] = None,
download: bool = False,
include_classes: List[int] = None,
return_indicies: bool = False,
factors: List[str] = None,
) -> None:
super().__init__(root, train, transform, target_transform, download)
self.include_classes = include_classes
self.return_indicies = return_indicies
if self.include_classes is not None:
include = np.array([t in self.include_classes for t in self.targets])
self.data = self.data[include]
self.targets = np.array(self.targets)[include]
self.factors = None
if factors is not None:
self.factors = []
factors_df = pd.read_csv(self.FACTORS_DF_PATH, index_col=0)
for f in factors:
if f == 'mean_color':
self.factors.append(self.data.mean((1, 2)))
elif f == 'color_minmax_diff':
self.factors.append((self.data.max((1, 2, 3)) - self.data.min((1, 2, 3)))[..., None])
else:
self.factors.append(torch.load(factors_df.loc[f][f'path_{"train" if train else "test"}']))
self.factors = np.concatenate(self.factors, axis=1).astype(np.float32)
def __getitem__(self, index):
out = list(super().__getitem__(index))
if self.return_indicies:
out.append(index)
if self.factors is not None:
out.append(self.factors[index])
return tuple(out)
@property
def factors_dim(self) -> int:
return self.factors.shape[1] if self.factors is not None else 0
def __repr__(self) -> str:
return super().__repr__() + f'\nClasses: {self.include_classes}'
class MyCIFAR10DataModule(CIFAR10DataModule):
dataset_cls = MyCIFAR10
def __init__(
self,
data_dir: Optional[str] = os.environ.get('DATA_ROOT', os.getcwd()),
val_split: Union[int, float] = 0.1,
num_workers: int = 16,
normalize: bool = True,
batch_size: int = 32,
test_batch_size: Optional[int] = None,
data_seed: int = 42,
shuffle: bool = False,
pin_memory: bool = True,
drop_last: bool = True,
random_labelling: bool = False,
random_labelling_seed: Optional[int] = None,
n_classes: int = 10,
gt2class: Optional[str] = None,
n_train_images: int = -1,
multi_task: bool = "",
path2pool: str = '',
n_tasks: int = 1,
persistent_workers: bool = False,
return_indicies: bool = False,
to_lightness: bool = False,
include_classes: List[int] = None,
augs: bool = False,
factors: Optional[List[str]] = None,
train_val_split: Optional[str] = None,
*args: Any,
**kwargs: Any,
) -> None:
super().__init__( # type: ignore[misc]
data_dir=data_dir,
val_split=val_split,
num_workers=num_workers,
normalize=normalize,
batch_size=batch_size,
seed=data_seed,
shuffle=shuffle,
pin_memory=pin_memory,
drop_last=drop_last,
)
self.EXTRA_ARGS['download'] = True
self.dataset_cls = partial(MyCIFAR10, return_indicies=return_indicies, include_classes=include_classes, factors=factors)
assert n_train_images == -1 or n_train_images >= batch_size or not drop_last
self.test_batch_size = test_batch_size or self.batch_size
self.n_train_images = n_train_images
self.random_labelling_seed = random_labelling_seed if random_labelling_seed is not None else self.seed
print(f'[Datamodule] ===> : Random_labelling={random_labelling}, Shuffle={shuffle}, Data_seed={data_seed}, Persistent_workers={persistent_workers}')
self.random_labelling = random_labelling
self._num_classes = n_classes
# if not random_labelling:
# print(type(gt2class))
# assert self.num_classes == 10 or isinstance(gt2class, str)
self._gt2class = None
if isinstance(gt2class, str) and gt2class != '' and not self.random_labelling:
self._gt2class = {gt: i for i, clss in enumerate(gt2class.split('|')) for gt in clss.split(',') }
print(self._gt2class)
self.persistent_workers = persistent_workers
self.to_lightness = to_lightness
if self.to_lightness:
self.dims = (1, 32, 32)
self.augs = augs
self.train_transforms=self.get_transforms(train=True)
self.val_transforms=self.get_transforms(train=False)
self.test_transforms=self.get_transforms(train=False)
self.train_val_split = train_val_split
@staticmethod
def add_argparse_args(parent_parser):
parser = argparse.ArgumentParser(parents=[parent_parser], add_help=False)
parser.add_argument('--batch_size', type=int, default=256)
parser.add_argument('--data_seed', type=int, default=42)
parser.add_argument('--random_labelling_seed', type=int, default=42)
parser.add_argument('--n_train_images', type=int, default=-1)
parser.add_argument('--no-shuffle', dest='shuffle', action='store_false')
parser.add_argument('--shuffle', dest='shuffle', action='store_true')
parser.set_defaults(shuffle=True)
parser.add_argument('--multi_task', type=str, default='')
# parser.add_argument('--n_tasks', type=int, default=1)
parser.add_argument('--val_split', type=float, default=0.1)
parser.add_argument('--gt2class', type=str, default="")
parser.add_argument('--path2pool', type=str, default="")
parser.add_argument('--random_labelling', action='store_true', default=False)
parser.add_argument('--no_drop_last', dest='drop_last', action='store_false', default=True)
parser.add_argument('--persistent_workers', action='store_true', default=False)
parser.add_argument('--return_indicies', action='store_true', default=False)
parser.add_argument('--to_lightness', action='store_true', default=False)
parser.add_argument('--normalize', action='store_true', default=True)
parser.add_argument('--no_normalize', dest='normalize', action='store_false', default=True)
parser.add_argument('--include_classes', type=int, default=None, nargs='+')
parser.add_argument('--augs', action='store_true', default=False)
parser.add_argument('--no_augs', dest='augs', action='store_false', default=False)
parser.add_argument('--factors', type=str, default=None, nargs='*')
parser.add_argument('--train_val_split', type=str, default=None)
parser.add_argument('--dataset_path', type=str, default='')
return parser
@property
def num_classes(self) -> int:
return self._num_classes
def get_transforms(self, train=False) -> Callable:
t = [transforms.ToTensor()]
if self.augs and train:
t += [
transforms.RandomCrop(32, padding=4),
transforms.RandomHorizontalFlip(),
]
if self.to_lightness:
t.append(Rgb2L())
if self.normalize:
if self.to_lightness: raise ValueError(f'{self.normalize=} and {self.to_lightness=}')
t.append(cifar10_normalization())
return transforms.Compose(t)
@property
def factors_dim(self) -> int:
return self.dataset_train.dataset.factors_dim
def setup(self, stage: Optional[str] = None) -> None:
"""
Creates train, val, and test dataset
"""
# prepare all datasets
super().setup()
if self.dataset_train.dataset.factors is not None:
scaler = StandardScaler()
self.dataset_train.dataset.factors = scaler.fit_transform(self.dataset_train.dataset.factors)
self.dataset_val.dataset.factors = scaler.transform(self.dataset_val.dataset.factors)
self.dataset_test.factors = scaler.transform(self.dataset_test.factors)
print(f'[Datamodule] ===> {self.dataset_train.indices[:20]=}')
if self.random_labelling:
g = torch.Generator().manual_seed(self.random_labelling_seed)
self.dataset_train.dataset.targets = torch.randint(0, self.num_classes, (len(self.dataset_train.dataset),), generator=g).tolist()
self.dataset_val.dataset.targets = torch.randint(0, self.num_classes, (len(self.dataset_val.dataset),), generator=g).tolist()
self.dataset_test.targets = torch.randint(0, self.num_classes, (len(self.dataset_test),), generator=g).tolist()
elif self._gt2class is not None:
classes = self.dataset_train.dataset.classes
self.dataset_train.dataset.targets = [self._gt2class[classes[t]] for t in self.dataset_train.dataset.targets]
self.dataset_val.dataset.targets = [self._gt2class[classes[t]] for t in self.dataset_val.dataset.targets]
self.dataset_test.targets = [self._gt2class[classes[t]] for t in self.dataset_test.targets]
def _split_dataset(self, dataset: Dataset, train: bool = True) -> Dataset:
"""
Splits the dataset into train and validation set
"""
if self.train_val_split is None:
len_dataset = len(dataset) # type: ignore[arg-type]
splits = self._get_splits(len_dataset)
dataset_train, _, dataset_val = random_split(dataset, splits, generator=torch.Generator().manual_seed(self.seed))
else:
splits = torch.load(self.train_val_split)
dataset_train, dataset_val = [Subset(dataset, indices) for indices in splits]
if train:
return dataset_train
return dataset_val
def _get_splits(self, len_dataset: int) -> List[int]:
"""
Computes split lengths for train and validation set
"""
if isinstance(self.val_split, int):
val_len = self.val_split
elif isinstance(self.val_split, float):
val_len = int(self.val_split * len_dataset)
else:
raise ValueError(f'Unsupported type {type(self.val_split)}')
if self.n_train_images == -1:
train_len = len_dataset - val_len
else:
train_len = self.n_train_images
splits = [train_len, len_dataset - train_len - val_len, val_len]
print('train/_/val splits :', splits)
return splits
def _data_loader(
self,
dataset: torch.utils.data.Dataset,
generator: Any = None,
shuffle: bool = False,
persistent_workers: bool = False,
batch_size: int = None,
drop_last: bool = None,
) -> torch.utils.data.DataLoader:
return torch.utils.data.DataLoader(
dataset,
batch_size=batch_size or self.batch_size,
shuffle=shuffle,
generator=generator,
num_workers=self.num_workers,
drop_last=self.drop_last if drop_last is None else drop_last,
pin_memory=self.pin_memory,
worker_init_fn=MyCIFAR10DataModule._worker_init_fn,
persistent_workers=persistent_workers,
)
def train_dataloader(
self,
generator: Optional[torch.Generator] = None,
persistent_workers: bool = False,
batch_size: int = None,
drop_last: bool = None,
) -> torch.utils.data.DataLoader:
""" The train dataloader """
persistent_workers = persistent_workers or self.persistent_workers
return self._data_loader(self.dataset_train, shuffle=self.shuffle, generator=generator, persistent_workers=persistent_workers, batch_size=batch_size, drop_last=drop_last)
def val_dataloader(self, persistent_workers: bool = False, batch_size: int = None) -> torch.utils.data.DataLoader:
""" The val dataloader """
persistent_workers = persistent_workers or self.persistent_workers
batch_size = batch_size or self.test_batch_size
return self._data_loader(self.dataset_val, persistent_workers=persistent_workers, batch_size=batch_size, drop_last=False)
def test_dataloader(self, persistent_workers: bool = False, batch_size: int = None) -> torch.utils.data.DataLoader:
""" The val dataloader """
batch_size = batch_size or self.test_batch_size
return self._data_loader(self.dataset_test, persistent_workers=persistent_workers, batch_size=batch_size, drop_last=False)
@staticmethod
def _worker_init_fn(_id):
seed = torch.utils.data.get_worker_info().seed % 2**32
random.seed(seed)
torch.manual_seed(seed)
torch.cuda.manual_seed(seed)
np.random.seed(seed)