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Installation process and environment
conda create -n CAFE_fig -c etetoolkit 'ete3==3.0.0b35' conda list # # Name Version Build Channel blas 1.0 mkl http://mirrors.ustc.edu.cn/anaconda/pkgs/free cairo 1.14.8 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free certifi 2016.2.28 py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free ete3 3.0.0b35 py35_0 http://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda fontconfig 2.12.1 3 http://mirrors.ustc.edu.cn/anaconda/pkgs/free freetype 2.5.5 2 http://mirrors.ustc.edu.cn/anaconda/pkgs/free glib 2.50.2 1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free harfbuzz 0.9.39 2 http://mirrors.ustc.edu.cn/anaconda/pkgs/free libffi 3.2.1 1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free libgfortran 3.0.0 1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free libiconv 1.14 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free libpng 1.6.30 1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free libxml2 2.9.4 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free libxslt 1.1.29 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free lxml 3.8.0 py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free mkl 2017.0.3 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free numpy 1.13.1 py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free openssl 1.0.2l 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free pango 1.40.3 1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free pcre 8.39 1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free pip 9.0.1 py35_1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free pixman 0.34.0 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free pyqt 4.11.4 py35_4 http://mirrors.ustc.edu.cn/anaconda/pkgs/free python 3.5.4 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free qt 4.8.7 4 http://mirrors.ustc.edu.cn/anaconda/pkgs/free readline 6.2 2 http://mirrors.ustc.edu.cn/anaconda/pkgs/free scipy 0.19.1 np113py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free setuptools 36.4.0 py35_1 http://mirrors.ustc.edu.cn/anaconda/pkgs/free sip 4.18 py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free six 1.10.0 py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free sqlite 3.13.0 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free tk 8.5.18 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free wheel 0.29.0 py35_0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free xz 5.2.3 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free zlib 1.2.11 0 http://mirrors.ustc.edu.cn/anaconda/pkgs/free
I tried the command:
python3 ./CAFE_fig.py example_result.cafe -c Isoptera=zne,mna -pb 0.05 -pf 0.05 --dump test/ -g .pdf --count_all_expansions Parsing CAFE report... done! Writing test/summary.pdf ETE: cannot connect to X server
The text was updated successfully, but these errors were encountered:
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Installation process and environment
I tried the command:
The text was updated successfully, but these errors were encountered: