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The chloroplast genome assembly resulted in only small fragments. #359

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WANGLU225 opened this issue Nov 22, 2024 · 0 comments
Open

The chloroplast genome assembly resulted in only small fragments. #359

WANGLU225 opened this issue Nov 22, 2024 · 0 comments

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@WANGLU225
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Hello, Professor! I have been using GetOrganelle to assemble the chloroplast genome, but despite trying various parameters, I consistently obtain only small fragments. Could you please help me understand the possible reasons for this issue? The following two images show the assembly results and the parameter settings in Bandage.

13ff5b4759f92272de139778c289aef
475c54deaaa68a08a4dc6d74206b11b
get_org.log.txt

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