From e21f0fa4b33bbbcbe5f71d16a09ea6e4e4314be1 Mon Sep 17 00:00:00 2001
From: JianJun Jin <39948588+JianjunJin@users.noreply.github.com>
Date: Sat, 27 Jan 2024 12:38:43 -0500
Subject: [PATCH] Update README.md

update citation for SPAdes
---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index aaa4ae0..f2bcbe1 100644
--- a/README.md
+++ b/README.md
@@ -25,7 +25,7 @@ Please denote the version of GetOrganelle as well as the dependencies in your ma
 
 Please also cite the dependencies if used:
 
-SPAdes: [Bankevich, A., S. Nurk, D. Antipov, A. A. Gurevich, M. Dvorkin, A. S. Kulikov, V. M. Lesin, S. I. Nikolenko, S. Pham, A. D. Prjibelski, A. V. Pyshkin, A. V. Sirotkin, N. Vyahhi, G. Tesler, M. A. Alekseyev and P. A. Pevzner. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. Journal of Computational Biology 19: 455-477.](https://www.liebertpub.com/doi/abs/10.1089/cmb.2012.0021)
+SPAdes: [Prjibelski, A., Antipov, D., Meleshko, D., Lapidus, A. and Korobeynikov, A. 2020. Using SPAdes de novo assembler. Current protocols in bioinformatics, 70(1), p.e102.](https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.102) 
 
 Bowtie2: [Langmead, B. and S. L. Salzberg. 2012. Fast gapped-read alignment with Bowtie 2. Nature Methods 9: 357-359.](https://www.nature.com/articles/nmeth.1923)