Trajectory alignment error

[romanchemist]

Hi! I have some problem. I suppoused that it caused by my trajectories, but I take your example files and it's same type error right at the beginning of work...

[AnjaConev]

Hi, thank you for using EnGens!

Could you describe the environment that you are working in?
Is it on Google Colab or are you using the docker image locally?

[romanchemist]

I've installed it locally from conda with no using docker ("2. Conda environment build" from README.md) . yml file is in zip
conda_engens.zip

[AnjaConev]

Hi!
I just reinstalled it on my machine and I was not getting the same issue.
Are you using the pentapeptide example trajectories or your own trajectory?

One thing to try is possibly running:
mdconvert --help
To make sure mdconvert is installed properly in your environment

[romanchemist]

I used your files (This can be seen in the screenshot above). mdconvert gives a warning, but it seems uncritical

[romanchemist]

Also I try to select the active center and I get a similar error. Apparently it really is a matter of my packages. But then it’s surprising that you were able to run everything correctly with my environment... If you can tell me something about the open mm mdconvert or something else, I’ll be grateful