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gnomad update #202

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cheanney opened this issue Dec 15, 2023 · 1 comment
Open

gnomad update #202

cheanney opened this issue Dec 15, 2023 · 1 comment
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module update something needs to be updated

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@cheanney
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Hi,

The gnomad v4 is out. Any plans on updating this source?

Thanks,

Anney

@kmoad
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kmoad commented Jan 12, 2024

We do plan to update to v4. It's more complicated than a typical annotator because the size of gnomad4 does not work with our model of distributing annotator data to user machines. Arguably, gnomad3 and some other full-genome annotators were already too large.

We are working on a version of gnomad that supports querying remote data sources, probably using the hail tables. Doing this performantly is driving some changes in our annotator architecture.

@jasminebro jasminebro added module update something needs to be updated labels Feb 28, 2024
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