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Is grch38 supported? #16

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a00101 opened this issue Apr 23, 2020 · 1 comment
Open

Is grch38 supported? #16

a00101 opened this issue Apr 23, 2020 · 1 comment

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@a00101
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a00101 commented Apr 23, 2020

Dear Karchin
I have maf file from aligning grch38 ver.
Can I get a hg38 'snvboxgene.bed' from you?

Thanks.
@ctokheim
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Currently, 20/20+ does not have pre-made data files for hg38. One work around could be to liftover the variant calls from hg38 coordinates to hg19 coordinates. Then you could use the already existing data files.

@schulter schulter mentioned this issue Sep 8, 2020
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@ctokheim @a00101