configs.json

{
  "GALEN": {
    "prediction": {
      "dataset": "GALEN",
      "task": "prediction",
      "lr": 0.01,
      "lr_schedule": null,
      "margin": 0.15,
      "neg_dist": 5,
      "num_neg": 1,
      "reg_factor": 0.4
    },
    "inferences": {
      "dataset": "GALEN",
      "task": "inferences",
      "lr": 0.005,
      "lr_schedule": 2000,
      "margin": 0.05,
      "neg_dist": 1,
      "num_neg": 2,
      "reg_factor": 0
    }
  },
  "GO": {
    "prediction": {
      "dataset": "GO",
      "task": "prediction",
      "lr": 0.01,
      "lr_schedule": null,
      "margin": 0.15,
      "neg_dist": 5.5,
      "num_neg": 5,
      "reg_factor": 0.5
    },
    "inferences": {
      "dataset": "GO",
      "task": "inferences",
      "lr": 0.005,
      "lr_schedule": null,
      "margin": 0.05,
      "neg_dist": 3,
      "num_neg": 3,
      "reg_factor": 0.05
    }
  },
  "ANATOMY": {
    "prediction": {
      "dataset": "ANATOMY",
      "task": "prediction",
      "epochs": 7000,
      "lr": 0.01,
      "lr_schedule": null,
      "margin": 0.05,
      "neg_dist": 5.5,
      "num_neg": 3,
      "reg_factor": 0.3
    },
    "inferences": {
      "dataset": "ANATOMY",
      "task": "inferences",
      "epochs": 7000,
      "lr": 0.001,
      "lr_schedule": null,
      "margin": 0.05,
      "neg_dist": 2,
      "num_neg": 2,
      "reg_factor": 0.05
    }
  },
  "PPI": {
    "yeast": {
      "dataset": "yeast",
      "lr": 0.01,
      "lr_schedule": 2000,
      "margin": 0.02,
      "neg_dist": 2.5,
      "num_neg": 4,
      "reg_factor": 0.2
    },
    "human": {
      "dataset": "human",
      "lr": 0.01,
      "lr_schedule": null,
      "margin": 0.005,
      "neg_dist": 3.5,
      "num_neg": 5,
      "reg_factor": 0.3
    }
  }
}