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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"
[project]
name = "tumourkit"
authors = [
{ name = "Jose Pérez Cano", email = "[email protected]" },
]
description = "A SDK for tumour study"
readme = "README.md"
requires-python = ">=3.8"
classifiers = [
"Development Status :: 2 - Pre-Alpha",
"Environment :: GPU :: NVIDIA CUDA :: 11.7",
"Environment :: Console",
"Intended Audience :: Healthcare Industry",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"License :: OSI Approved :: GNU Affero General Public License v3",
"Natural Language :: English",
"Operating System :: MacOS",
"Operating System :: POSIX :: Linux",
"Operating System :: Microsoft :: Windows",
"Programming Language :: Python :: 3.8",
"Programming Language :: Python :: 3.9",
"Programming Language :: Python :: 3.10",
"Typing :: Stubs Only",
]
license = { file = "LICENSE" }
dynamic = ["version", "dependencies"]
[tool.setuptools.packages.find]
exclude = ["logos"]
[tool.setuptools.dynamic]
version = { attr = "tumourkit.__version__" }
dependencies = { file = "requirements.txt" }
[project.scripts]
hovernet2geojson = "tumourkit.preprocessing.hovernet2geojson:main"
centroids2png = "tumourkit.preprocessing.centroids2png:main"
hovernet2centroids = "tumourkit.preprocessing.hovernet2centroids:main"
geojson2pngcsv = "tumourkit.preprocessing.geojson2pngcsv:main"
pngcsv2centroids = "tumourkit.preprocessing.pngcsv2centroids:main"
pngcsv2geojson = "tumourkit.preprocessing.pngcsv2geojson:main"
pngcsv2graph = "tumourkit.preprocessing.pngcsv2graph:main"
graph2centroids = "tumourkit.preprocessing.graph2centroids:main"
centroidspng2csv = "tumourkit.preprocessing.centroidspng2csv:main"
make_dirs = "tumourkit.make_dirs:main"
run_training = "tumourkit.train_pipe:main"
run_inference = "tumourkit.infer_pipe:main"
run_research = "tumourkit.research_pipe:main"
run_evaluation = "tumourkit.eval_pipe:main"
merge_cells = "tumourkit.postprocessing.merge_cells:main"
remove_uncertain = "tumourkit.preprocessing.remove_uncertain:main"
draw_cells = "tumourkit.postprocessing.draw_cells:main"
start_app = "tumourkit.demo.app:main"
draw_graph = "tumourkit.postprocessing.draw_graph:main"
extract_tensorboard = "tumourkit.postprocessing.extract_tensorboard:main"
plot_logs = "tumourkit.postprocessing.plot_logs:main"