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FSL : cp 2nd parameter used or generatedBy #28

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thomasbtnfr opened this issue Feb 7, 2023 · 1 comment
Open

FSL : cp 2nd parameter used or generatedBy #28

thomasbtnfr opened this issue Feb 7, 2023 · 1 comment

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@thomasbtnfr
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thomasbtnfr commented Feb 7, 2023

How should the following lines be modelled in BIDS-prov?

mkdir .files

cp /usr/local/packages/fsl-5.0.8/doc/fsl.css .files

Here are some suggestions:

image

image

Note that in the second option the entity .files has been generated by two activities which is not currently provided in BIDS-prov.

Furthermore, I think it would be interesting to start from a report_log.html file and propose a modelling in BIDS-prov. This could allow to answer many problems that we start to be confronted, mainly for entities.

@cmaumet

@cmaumet
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cmaumet commented Feb 8, 2023

@thomasbtnfr: thanks for this! I like the first model and I think we could additionnally include something like .files/fsl.css wasGeneratedBy feat_mean_script_cp

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