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Conversion from ISA-JSON to ISA-TAB drops unrecognized assays if measurement type and technology types not found in /resources/config/json/default by the converter
strict requirement on measurement type.term and technology type.term value: exact match needed.
strict requirement on protocol_type.term value: exact match needed.
strict requirement on the sequence of processes and input/output (no support for optional steps, e.g. optional Labeling events during sample processing
Symptoms:
Conversion from ISA-JSON to ISA-TAB drops unrecognized assays if measurement type and technology types not found in
/resources/config/json/default
by the convertermeasurement type.term
andtechnology type.term
value: exact match needed.protocol_type.term
value: exact match needed.TODO:
https://github.com/EBI-Metabolights/MtblsWS-Py/blob/master/resources/MetaboLightsAssayMaster.tsv
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