From ddd299fdbecc774ebd0c9bbce259e6c418513efa Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?G=C3=B6k=C3=A7en=20Eraslan?= <eraslan.gokcen@gene.com>
Date: Fri, 5 Jul 2024 14:56:42 -0700
Subject: [PATCH] Switch to modisco-lite PyPI and pin pygenomeviz version

Fixes needed for the PyPI release
---
 setup.cfg | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/setup.cfg b/setup.cfg
index 0a58f80..f7bad31 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -61,7 +61,7 @@ install_requires =
     pymemesuite
     torch >= 2.0
     pytorch-lightning >= 2.0
-    modisco-lite @ git+https://github.com/jmschrei/tfmodisco-lite.git
+    modisco-lite >= 2.2.1
     biopython
     enformer-pytorch
     genomepy
@@ -72,7 +72,7 @@ install_requires =
     pyBigWig
     ledidi
     tangermeme
-    pygenomeviz
+    pygenomeviz <= 0.4.4
 
 
 [options.packages.find]