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modules.json
109 lines (109 loc) · 4.26 KB
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modules.json
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{
"name": "bl5632-nf-lenski",
"homePage": "https://github.com/gtk-teaching/bl5632-nf-lenski",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bcftools/call": {
"branch": "master",
"git_sha": "44096c08ffdbc694f5f92ae174ea0f7ba0f37e09",
"installed_by": [
"modules"
]
},
"bowtie2/align": {
"branch": "master",
"git_sha": "0fe30831abbc2ed115e46e92330edf38f56edc3d",
"installed_by": [
"fastq_align_bowtie2",
"modules"
]
},
"fastqc": {
"branch": "master",
"git_sha": "285a50500f9e02578d90b3ce6382ea3c30216acd",
"installed_by": [
"modules"
]
},
"samtools/faidx": {
"branch": "master",
"git_sha": "f153f1f10e1083c49935565844cccb7453021682",
"installed_by": [
"modules"
]
},
"samtools/flagstat": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": [
"bam_stats_samtools"
]
},
"samtools/idxstats": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": [
"bam_stats_samtools"
]
},
"samtools/index": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": [
"bam_sort_stats_samtools"
]
},
"samtools/sort": {
"branch": "master",
"git_sha": "4352dbdb09ec40db71e9b172b97a01dcf5622c26",
"installed_by": [
"bam_sort_stats_samtools"
]
},
"samtools/stats": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": [
"bam_stats_samtools"
]
},
"trimgalore": {
"branch": "master",
"git_sha": "a98418419ae6c9df3cf6cf108d1e1aba71037d5a",
"installed_by": [
"modules"
]
}
}
},
"subworkflows": {
"nf-core": {
"bam_sort_stats_samtools": {
"branch": "master",
"git_sha": "4352dbdb09ec40db71e9b172b97a01dcf5622c26",
"installed_by": [
"fastq_align_bowtie2",
"subworkflows"
]
},
"bam_stats_samtools": {
"branch": "master",
"git_sha": "f4596fe0bdc096cf53ec4497e83defdb3a94ff62",
"installed_by": [
"bam_sort_stats_samtools"
]
},
"fastq_align_bowtie2": {
"branch": "master",
"git_sha": "55e7bb6d5279ec21f254bbab0943117cb3d2fc35",
"installed_by": [
"subworkflows"
]
}
}
}
}
}
}