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wdl-unit-tests

Runs on Cromwell WOMtool Validation

A collection of WDL (Workflow Description Language) workflows designed for testing WDL execution environments and backend configurations. Each workflow tests a specific aspect of WDL functionality while maintaining simplicity for easy debugging and verification.

Usage

Each workflow can be run using standard WDL execution engines:

# Using Cromwell
java -jar cromwell.jar run <workflow_name>.wdl

# Using miniwdl
miniwdl run <workflow_name>.wdl

Purpose

This test suite is designed to:

  • Validate WDL execution environments
  • Test different backend configurations
  • Verify software deployment methods (native, container, modules)
  • Serve as examples for WDL development

Contributing

See our CONTRIBUTING.md for exact details on how to contribute.