ci_job.yml

name: CI Tests
run-name: ${{ github.actor }} is testing the code
# Set the access for individual scopes, or use permissions: write-all
permissions:
  pull-requests: write
on:
  push:
  pull_request:
  workflow_dispatch:
jobs:
  lint:
    runs-on: ubuntu-latest
    steps:
    -
      name: Ceckout
      uses: actions/checkout@v4
    -
      name: Set up Python 3.10
      uses: actions/setup-python@v3
      with:
        python-version: "3.10"
    -
      name: Install packages
      run: |
        python3 -m pip install -e .[test]
    -
      name: Linting
      run: make lint
  test:
    runs-on: ubuntu-latest
    env:
      NUMEXPR_MAX_THREADS: 8
      GIT_SUBMODULE_STRATEGY: recursive
    strategy:
      max-parallel: 5
      matrix:
        python-version: [3.7, 3.8, 3.9, "3.10", "3.11"]
    steps:
      -
        name: Checkout
        uses: actions/checkout@v4
        with:
          submodules: recursive
      -
        name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v3
        with:
          python-version: ${{matrix.python-version}}
      -
        name: Add conda to system path
        run: |
          # $CONDA is an environment variable pointing to the root of the
          # miniconda directory
          echo $CONDA/bin >> $GITHUB_PATH
      -
        name: Set up services
        run: |
          docker compose up -d --remove-orphans
      -
        name: Install dependencies on python ${{matrix.python-version}}
        run: |
          conda create -c conda-forge -n tests -y -q python pip cartopy make mysql-common==8.3.0 mysql-libs=8.3.0 mysqlclient
          conda run -n tests python -m pip install -e .[test] dask==2024.8.0
      -
        name: Running tests for python ${{ matrix.python-version }}
        run: |
          conda run -n tests make test_coverage
      -
        name: Upload coverage to Codecov
        uses: codecov/codecov-action@v1
  docs:
    runs-on: ubuntu-latest
    permissions:
      contents: write
    env:
      NUMEXPR_MAX_THREADS: 8
      GIT_SUBMODULE_STRATEGY: recursive
      DJANGO_ALLOW_ASYNC_UNSAFE: 1
    steps:
      -
        name: Checkout
        uses: actions/checkout@v4
        with:
          submodules: recursive
      -
        name: Set up Python
        uses: actions/setup-python@v3
      -
        name: Add conda to system path
        run: |
          echo $CONDA/bin >> $GITHUB_PATH
      -
        name: Install freva
        run: |
          conda create -c conda-forge -n docs -y -q cartopy make mysql-common==8.3.0 mysql-libs=8.3.0 mysqlclient dask==2024.8.0 freva
      -
        name: Set up services
        run: |
          docker compose up -d --remove-orphans
      -
        name: Preparing docs
        run: |
          conda run -n docs make prepdocs
      -
        name: Creating docs
        run: |
          conda run -n docs make docs
      -
        name: Setup Pages
        uses: actions/configure-pages@v2
        if: ${{ github.ref == 'refs/heads/main' }}
      -
        name: Upload artifact
        uses: actions/upload-pages-artifact@v1
        if: ${{ github.ref == 'refs/heads/main' }}
        with:
          # Upload entire repository
          path: './docs/build/html'
      -
        name: Deploy
        uses: peaceiris/actions-gh-pages@v3
        if: ${{ github.ref == 'refs/heads/main' }}
        with:
          github_token: ${{ secrets.GITHUB_TOKEN }}
          publish_dir: ./docs/build/html
  dependabot:
    name: Merge PR by dependabot
    runs-on: ubuntu-latest
    needs: [docs, test, lint]
    # Specifically check that dependabot (or another trusted party) created this pull-request, and that it has been labelled correctly.
    if: github.event.pull_request.user.login == 'dependabot[bot]'
    steps:
      - name: Dependabot metadata
        id: metadata
        uses: dependabot/fetch-metadata@v1
        with:
          github-token: "${{ secrets.GITHUB_TOKEN }}"
      - name: Approve dependabot's PR
        run: gh pr review --approve "$PR_URL"
        env:
          PR_URL: ${{github.event.pull_request.html_url}}
          GITHUB_TOKEN: ${{secrets.TOKEN}}
      - name: Auto-merge for dependabot's PR
        run: gh pr merge --merge --auto "$PR_URL"
        env:
          PR_URL: ${{github.event.pull_request.html_url}}
          GITHUB_TOKEN: ${{secrets.TOKEN}}