ccre-dam-qaqc.yml

name: QAQC dam data
on:
   push:
      branches: [ ccre-dam-data ]
      #paths: 
      #- 'ccre-waterquality.csv'
   #workflow_dispatch:
jobs:
  qaqc_run:
     runs-on: ubuntu-22.04
     container:
      image: rocker/tidyverse:4.2
     steps:
       - name: Checkout repo
         uses: actions/checkout@v3
         with:
           ref: ccre-dam-data-qaqc
           fetch-depth: 1
       - name: Download necessary files
         run: |
            wget https://raw.githubusercontent.com/FLARE-forecast/CCRE-data/ccre-dam-data/ccre-waterquality.csv
            wget https://raw.githubusercontent.com/FLARE-forecast/CCRE-data/ccre-dam-data/ccre-met.csv
       - name: Run QAQC script
         run: | 
           R -e 'remotes::install_version("EDIutils", version = "1.0.2")'
           R -e 'remotes::install_version("xml2", version = "1.3.3")'
           R -e 'remotes::install_version("here", version = "1.0.1")'
           R -e 'remotes::install_version("suncalc", version = "0.5.1")'
           Rscript $GITHUB_WORKSPACE/R/QAQC_workflow.R
           Rscript $GITHUB_WORKSPACE/R/QAQC_met_workflow.R
       - name: Configure Git
         run: |
            git config --global --add safe.directory "$GITHUB_WORKSPACE"
            git config --local user.name "$GITHUB_ACTOR"
            git config --local user.email "$GITHUB_ACTOR@users.noreply.github.com"
       - name: Commit files
         run: |
            git add ccre-waterquality_L1.csv
            git add ccre_met_L1.csv
            git commit -m "Updating QAQC files" || echo "No changes to commit"
            git push -f || echo "No changes to commit"