From 97ecb53edca379a6f0d58da96d2947f53ce36cc4 Mon Sep 17 00:00:00 2001 From: dramanica Date: Fri, 8 Dec 2023 05:03:15 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20EvolEcol?= =?UTF-8?q?Group/geograph@6cd7ee502102816ac0b60efed72e90cd7857619d=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- index.html | 2 +- pkgdown.yml | 2 +- reference/auxiliary.html | 4 ---- reference/buffer.html | 4 ---- reference/closestNode.html | 4 ---- reference/combineCosts.html | 6 +++--- reference/connectivity-2.png | Bin 137977 -> 140161 bytes reference/connectivity.html | 4 ---- reference/dijkstra-methods.html | 4 ---- reference/dropDeadEdges.html | 4 ---- reference/extractFromLayer.html | 4 ---- reference/findLand-1.png | Bin 117663 -> 116429 bytes reference/findLand.html | 18 +++++++----------- reference/gData-class.html | 4 ---- reference/gGraph-class.html | 4 ---- reference/geo.add.edges.html | 4 ---- reference/geo.change.attr.html | 4 ---- reference/getColors.html | 4 ---- reference/getCosts.html | 4 ---- reference/getEdges.html | 4 ---- reference/getNodesAttr.html | 4 ---- reference/isInArea.html | 4 ---- reference/makeGrid.html | 4 ---- reference/plot-gData.html | 4 ---- reference/plot-gGraph.html | 4 ---- reference/setCosts.html | 5 ----- reference/setDistCosts.html | 4 ---- reference/setEdges.html | 4 ---- search.json | 2 +- 29 files changed, 13 insertions(+), 106 deletions(-) diff --git a/index.html b/index.html index febd554..d75c13f 100644 --- a/index.html +++ b/index.html @@ -80,7 +80,7 @@

InstallationGitHub with:

 install.packages("devtools")
-devtools::install_github("thibautjombart/geoGraph")
+devtools::install_github("EvolEcolGroup/geograph/")

How the package works diff --git a/pkgdown.yml b/pkgdown.yml index 6888575..b2a5a70 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -3,7 +3,7 @@ pkgdown: 2.0.7 pkgdown_sha: ~ articles: geograph: geograph.html -last_built: 2023-12-08T04:50Z +last_built: 2023-12-08T05:01Z urls: reference: https://evolecolgroup.github.io/geograph/reference article: https://evolecolgroup.github.io/geograph/articles diff --git a/reference/auxiliary.html b/reference/auxiliary.html index fb23344..c5c2eac 100644 --- a/reference/auxiliary.html +++ b/reference/auxiliary.html @@ -130,10 +130,6 @@

Details

  • rebuild: in development.

    • -
    -

    Author

    -

    Thibaut Jombart (t.jombart@imperial.ac.uk)

    -

    Examples

    diff --git a/reference/buffer.html b/reference/buffer.html index 451f273..9ff6316 100644 --- a/reference/buffer.html +++ b/reference/buffer.html @@ -115,10 +115,6 @@

    Details

    -
    -

    Author

    -

    Thibaut Jombart (t.jombart@imperial.ac.uk)

    -

    Examples

    diff --git a/reference/closestNode.html b/reference/closestNode.html index c0baf5b..7b496ef 100644 --- a/reference/closestNode.html +++ b/reference/closestNode.html @@ -149,10 +149,6 @@

    See also

    geo.add.edges and geo.remove.edges to interactively add or remove edges in a gGraph object.

    -
    -

    Author

    -

    Thibaut Jombart (t.jombart@imperial.ac.uk)

    -

    Examples

    diff --git a/reference/combineCosts.html b/reference/combineCosts.html index cd869ea..3f5264a 100644 --- a/reference/combineCosts.html +++ b/reference/combineCosts.html @@ -115,10 +115,10 @@

    Examples
    data("worldgraph.40k")
 # new graph with custom cost function
 exp.cost <- function(x1, x2, cost.coeff) {
- exp(-abs(x1 - x2) * cost.coeff)
+  exp(-abs(x1 - x2) * cost.coeff)
 }
 # create a set of node costs
-worldgraph.40k@nodes.attr$meanProd<-runif(n=40962)
+worldgraph.40k@nodes.attr$meanProd <- runif(n = 40962)
 new_costs_graph <-
   setCosts(
     worldgraph.40k,
@@ -128,7 +128,7 @@ 
    Examples    cost.coeff = 0.5
   )
 # combine costs from the original graph with the new costs
-combine_costs_graph<- combineCosts(worldgraph.40k, new_costs_graph, method="sum")
+combine_costs_graph <- combineCosts(worldgraph.40k, new_costs_graph, method = "sum")