diff --git a/source/assembly/assembly.rst b/source/assembly/assembly.rst index f980358..361393b 100644 --- a/source/assembly/assembly.rst +++ b/source/assembly/assembly.rst @@ -72,7 +72,7 @@ assemstats After the assembly, one wants to look at the length distributions of the resulting assemblies. We have written the ``assemstats`` script for that:: - assemstats 100 ${SAMPLE}_${kmer}/contigs.fa + assemstats 200 ${SAMPLE}_${kmer}/contigs.fa Try to find out what each of the stats represent by trying other cut-off values than 100. One of the most often used statistics in assembly length distribution comparisons is