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Update BUSCO to v5 #42

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cschu opened this issue Feb 4, 2021 · 3 comments
Open

Update BUSCO to v5 #42

cschu opened this issue Feb 4, 2021 · 3 comments
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enhancement New feature or request

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@cschu
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cschu commented Feb 4, 2021

Version 5's conda installation supposedly reduces or even eliminates all the awkwardness with which busco is currently being run. Could be worth checking out...
@cschu cschu added the enhancement New feature or request label Feb 4, 2021
@lucventurini
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Wait, is BUSCO 5 incompatible with Minos?
I was installing it in the VM for the workshop :-(

@cschu
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cschu commented Feb 4, 2021

So, my last development was with v4. As far as I understand, v5 is still compatible to the old way of running busco. See here https://gitlab.com/ezlab/busco/-/issues/396#note_501330067.

@swarbred
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swarbred commented Feb 4, 2021

for the workshop I would stick with version 4

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@cschu @swarbred @lucventurini