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Increase the memory and time limit for BWAMEM2_INDEX
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mberacochea committed Jun 7, 2024
1 parent 60d0994 commit 10a248f
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions conf/modules.config
Original file line number Diff line number Diff line change
Expand Up @@ -226,8 +226,8 @@ process {

withName: 'BWAMEM2_INDEX' {
cpus = { check_max( 1 , 'cpus' ) }
memory = { check_max( 6.GB * task.attempt, 'memory' ) }
time = { check_max( 4.h * task.attempt, 'time' ) }
memory = { check_max( 16.GB * task.attempt, 'memory' ) }
time = { check_max( 6.h * task.attempt, 'time' ) }
}

withName: 'METABAT2_JGISUMMARIZEBAMCONTIGDEPTHS' {
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