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Heatmap for transcriptional dynamics in Dynamo #241

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jefferyUstc opened this issue Mar 14, 2023 · 2 comments
Open

Heatmap for transcriptional dynamics in Dynamo #241

jefferyUstc opened this issue Mar 14, 2023 · 2 comments

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@jefferyUstc
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The dynamical model (scvelo) recovers the latent time of the underlying cellular processes, then users can plot the top-likelihood genes in a heatmap form to represent the transcriptional dynamics (https://scvelo.readthedocs.io/en/stable/DynamicalModeling/#Latent-time). How can we make it in dynamo?

@github-actions
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Hello jefferyUstc, thank you for submitting this issue! We are super excited that you want to help us make Dynamo all that it can be. However, given that there has been no additional information added, this issue will be closed for now. Please reopen and provide additional information if you wish the Dynamo team to investigate further.

Additional information:

  • Filling in of the provided Template (What did you do, What did you expect to see, What did you see instead, What packages or external references (if any) were used)
  • Attaching the Stack Trace (Error message that shows up when Dynamo crashes - You can copy and paste this into the Github Issue)
  • Upload a .DYN file that showcases the issue in action and any additional needed files, such as Revit (Note: If you cannot share a project, you can recreate this in a quick mock-up file)
  • Upload a Screenshot of the error messages you see (Hover over the offending node and showcase said errors message in the screenshot)
  • Reproducible steps on how to create the error in question.

@QilongTang QilongTang reopened this Mar 14, 2023
@QilongTang
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@Amoursol FYI

@Amoursol Amoursol transferred this issue from DynamoDS/Dynamo May 18, 2023
@dynamo-ci-user dynamo-ci-user moved this to Triage in Dynamo Wishlist May 18, 2023
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