Dockerfile to package app

[project-delphi]

Once environments are shown to run and work, we'll get an ubuntu based dockerfile.

This will connect the directories and then run the setup script and launch commands.

[project-delphi]

@DavidAlberto , low priority.

[project-delphi]

something like this

# Base image
FROM ubuntu:22.04

# Set environment variables to avoid interactive prompts
ENV DEBIAN_FRONTEND=noninteractive

# Install dependencies
RUN apt-get update && apt-get install -y \
    curl \
    sudo \
    git \
    quarto \
    r-base \
    r-base-dev \
    libcurl4-openssl-dev \
    libssl-dev \
    libxml2-dev \
    libgit2-dev \
    pandoc \
    gdebi-core \
    && apt-get clean

# Install R Shiny server
RUN R -e "install.packages('shiny', repos='http://cran.rstudio.com/')"

# Clone the repo
WORKDIR /app
RUN git clone https://github.com/DavidAlberto/dashboard-rhizosphere.git

# Run the setup script
WORKDIR /app/dashboard-rhizosphere
RUN chmod +x setup.sh && ./setup.sh

# Expose the port for the dashboard
EXPOSE 3838

# Run the Quarto and Shiny dashboards
CMD quarto preview && R -e "shiny::runApp('app', host='0.0.0.0', port=3838)"